Dataset Dependency Graphs for Leakage-Aware Evaluation

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Documentation for package ‘splitGraph’ version 0.4.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

add_edges	Edit Dependency Graphs
as_igraph	Assemble and Validate Dependency Graphs
as_split_spec	Translate splitGraph Constraints into Stable Split Specifications
build_dependency_graph	Assemble and Validate Dependency Graphs
combine_graphs	Edit Dependency Graphs
create_edges	Create Canonical Node and Edge Tables
create_nodes	Create Canonical Node and Edge Tables
dependency_graph	Construct Core splitGraph S3 Objects
depgraph_validation_report	Validation Report Object for splitGraph Graphs
derive_split_constraints	Derive Split Constraints from Dependency Graphs
detect_dependency_components	Query Dependency Graph Structure
detect_shared_dependencies	Query Dependency Graph Structure
export_graph	Export a Dependency Graph for Other Tools
graph_edge_set	Construct Core splitGraph S3 Objects
graph_edit	Edit Dependency Graphs
graph_from_metadata	Build a Dependency Graph Directly from a Metadata Table
graph_from_metadata.data.frame	Build a Dependency Graph Directly from a Metadata Table
graph_from_metadata.default	Build a Dependency Graph Directly from a Metadata Table
graph_from_metadata.SummarizedExperiment	Build a Dependency Graph Directly from a Metadata Table
graph_node_set	Construct Core splitGraph S3 Objects
graph_query_result	Construct Core splitGraph S3 Objects
grouping_vector	Derive Split Constraints from Dependency Graphs
ingest_metadata	Standardize Sample Metadata
leakage_risk_summary	Validation Report Object for splitGraph Graphs
migrate_dependency_graph_json	Upgrade Serialized splitGraph JSON to the Current Schema Version
migrate_json	Upgrade Serialized splitGraph JSON to the Current Schema Version
migrate_split_spec_json	Upgrade Serialized splitGraph JSON to the Current Schema Version
pairwise_edges	Build Pairwise Leakage Edges from Continuous Similarity
plot.dependency_graph	Plot a Dependency Graph
query_edge_type	Query Dependency Graph Structure
query_neighbors	Query Dependency Graph Structure
query_node_type	Query Dependency Graph Structure
query_paths	Query Dependency Graph Structure
query_shortest_paths	Query Dependency Graph Structure
read_dependency_graph	Serialize a Dependency Graph to JSON
read_split_spec	Serialize a Split Specification to JSON
relatedness_edges_from_kinship	Build Pairwise Leakage Edges from Continuous Similarity
spatial_edges_from_coords	Build Pairwise Leakage Edges from Continuous Similarity
splitgraph_conditions	Classed Conditions Signalled by splitGraph
split_constraint	Construct Core splitGraph S3 Objects
split_spec	Validation Report Object for splitGraph Graphs
split_spec_validation	Validation Report Object for splitGraph Graphs
subset_graph	Edit Dependency Graphs
summarize_leakage_risks	Translate splitGraph Constraints into Stable Split Specifications
validate_graph	Assemble and Validate Dependency Graphs
validate_graph_json	Validate Serialized splitGraph JSON Against the Shipped Schema
validate_json	Validate Serialized splitGraph JSON Against the Shipped Schema
validate_split_spec	Translate splitGraph Constraints into Stable Split Specifications
validate_split_spec_json	Validate Serialized splitGraph JSON Against the Shipped Schema
write_dependency_graph	Serialize a Dependency Graph to JSON
write_split_spec	Serialize a Split Specification to JSON