R: Access Open Target

# Access Open Target

## Documentation for package ‘otargen’ version 2.0.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

adverseEventsQuery | Retrieve Adverse Events data for a specified drug.
chemblQuery | Retrieve ChEMBL data for a specified gene and disease.
clinVarQuery | Retrieve ClinVar data for a specified gene and disease.
compGenomicsQuery | Retrieve Comparative Genomics data for a specified gene.
depMapQuery | Retrieve DepMap Essentiality data for a specified gene.
europePMCQuery | Retrieve Europe PMC data for a specified gene and disease.
geneBurdenQuery | Retrieve Gene Burden data for a specified gene and disease.
geneOntologyQuery | Retrieve Gene Ontology data for a specified gene.
geneticConstraintQuery | Retrieve Genetic Constraint data for a specified gene.
genomicsEnglandQuery | Retrieve Genomics England data for a specified gene and disease.
gwasColocalisation | Retrieve calculated GWAS colocalisation data
gwasCredibleSet | Retrieve GWAS credible set data
gwasCredibleSetsQuery | Retrieve GWAS Credible Sets data for a specified target and disease.
hallmarksQuery | Retrieve Cancer Hallmarks data for a specified gene.
indicationsQuery | Retrieve Indications data for a specified drug.
interactionsQuery | Retrieve Interactions data for a specified gene.
knownDrugsChemblQuery | Retrieve Known Drugs data for a specified drug.
knownDrugsGeneQuery | Retrieve Known Drugs data for a specified gene.
locus2GeneQuery | Retrieve Locus-to-Gene Predictions data for a specified study locus.
mechanismsOfActionQuery | Retrieve Mechanisms of Action data for a specified drug.
mousePhenotypesQuery | Retrieve Mouse Phenotypes data for a specified gene.
orphanetQuery | Retrieve Orphanet data for a specified gene and disease.
overlapInfoForStudy | Retrieves overlap info for a study and a list of studies
pathwaysQuery | Retrieve Pathways data for a specified gene.
pharmacogenomicsChemblQuery | Retrieve Pharmacogenomics data for a specified drug.
pharmacogenomicsGeneQuery | Retrieve Pharmacogenomics data for a specified gene.
pharmacogenomicsVariantQuery | Retrieve Pharmacogenomics data for a specified variant.
qtlCredibleSetsQuery | Retrieve QTL Credible Sets data for a specified variant.
safetyQuery | Retrieve Safety Liabilities data for a specified gene.
sharedTraitStudiesQuery | Retrieve Shared Trait Studies data for specified diseases.
uniprotLiteratureQuery | Retrieve UniProt Literature data for a specified gene and disease.
uniProtVariantsQuery | Retrieve UniProt Variants data for a specified variant.
variantEffectPredictorQuery | Retrieve Variant Effect Predictor data for a specified variant.
variantEffectQuery | Retrieve Variant Effect data for a specified variant.
variantsQuery | Retrieve Variants data for a specified study locus.