Package: mmcmcBayes
Type: Package
Title: Multistage MCMC Method for Detecting DMRs
Version: 0.1.0
Authors@R: 
    c(
    person("Zhexuan", "Yang", 
           email = "zky5198@psu.edu", 
           role = c("aut", "cre")),
    person("Duchwan", "Ryu", 
           email = "dryu@niu.edu", 
           role = "aut"),
    person("Feng", "Luan", 
           email = "fluan1@niu.edu", 
           role = "aut")
    )
Description: Implements a multi-stage MCMC Bayesian framework for 
    detecting differentially methylated regions (DMRs) in epigenetic 
    data. It uses Bayesian inference with Alpha-Skew Generalized 
    Normal (ASGN) model and support Bayes Factor or Anderson-Darling
    Test for region selection. The methodology is based on Yang (2025)
    <https://www.proquest.com/docview/3218878972>. 
License: GPL-3
URL: https://github.com/zyang1919/mmcmcBayes
BugReports: https://github.com/zyang1919/mmcmcBayes/issues
Depends: R (>= 4.0.0)
Imports: MCMCpack (>= 1.4-0)
Suggests: kSamples, testthat (>= 3.0.0), knitr, rmarkdown
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2025-11-18 18:29:49 UTC; zky5198
Author: Zhexuan Yang [aut, cre],
  Duchwan Ryu [aut],
  Feng Luan [aut]
Maintainer: Zhexuan Yang <zky5198@psu.edu>
Repository: CRAN
Date/Publication: 2025-11-24 08:50:13 UTC
Built: R 4.4.3; ; 2025-12-08 04:03:11 UTC; windows
