Last updated on 2026-08-04 02:50:27 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.9 | 18.71 | 78.12 | 96.83 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.1.9 | 14.60 | 58.83 | 73.43 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.1.9 | 25.00 | 122.17 | 147.17 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 2.1.9 | 14.00 | 58.20 | 72.20 | NOTE | |
| r-devel-windows-x86_64 | 2.1.9 | 27.00 | 112.00 | 139.00 | NOTE | |
| r-patched-linux-x86_64 | 2.1.9 | 20.29 | 73.45 | 93.74 | NOTE | |
| r-release-linux-x86_64 | 2.1.9 | 19.51 | 74.74 | 94.25 | NOTE | |
| r-release-macos-arm64 | 2.1.9 | 5.00 | 24.00 | 29.00 | NOTE | |
| r-release-macos-x86_64 | 2.1.9 | 14.00 | 102.00 | 116.00 | NOTE | |
| r-release-windows-x86_64 | 2.1.9 | 25.00 | 117.00 | 142.00 | NOTE | |
| r-oldrel-macos-arm64 | 2.1.9 | NOTE | ||||
| r-oldrel-macos-x86_64 | 2.1.9 | 13.00 | 80.00 | 93.00 | NOTE | |
| r-oldrel-windows-x86_64 | 2.1.9 | 33.00 | 133.00 | 166.00 | NOTE |
Version: 2.1.9
Check: Rd files
Result: NOTE
checkRd: (-1) getPathToAttractor.Rd:23: Lost braces; missing escapes or markup?
23 | Specifies whether the actual attractor states are included in the resulting table or not. If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. This corresponds to the behaviour prior to \pkg{BoolNet} version 1.5. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state. In this case, the sequence can be empty if the start state is an attractor state.
| ^
checkRd: (-1) plotSequence.Rd:42: Lost braces; missing escapes or markup?
42 | Specifies whether the actual attractor states are included in the plot or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) sequenceToLaTeX.Rd:37: Lost braces; missing escapes or markup?
37 | Specifies whether the actual attractor states are included in the table or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) simulateSymbolicModel.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:66-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:72-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) testNetworkProperties.Rd:131: Lost braces; missing escapes or markup?
131 | If {perturb="functions"} or \code{perturb="transitions"} and \code{accumulate=FALSE}, the function returns a vector of percentages of original attractors found in each of the perturbed copies of the original network. If \code{accumulate=TRUE}, the function returns the overall percentage of original attractors found in all perturbed copies.
| ^
checkRd: (-1) testNetworkProperties.Rd:140: Lost braces
140 | code{params} can hold parameters \code{numSamples, flipBits} corresponding to the parameters of \code{\link{perturbTrajectories}} that define how many initial states are drawn and how many bits are flipped.
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.1.9
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp00KFYm’ ‘~/tmp/scratch/Rtmp03FZLh’
‘~/tmp/scratch/Rtmp04rdh6’ ‘~/tmp/scratch/Rtmp08a3ia’
‘~/tmp/scratch/Rtmp0SgILW’ ‘~/tmp/scratch/Rtmp0zmG5y’
‘~/tmp/scratch/Rtmp1QCaMt’ ‘~/tmp/scratch/Rtmp1ee5et’
‘~/tmp/scratch/Rtmp1pZH6p’ ‘~/tmp/scratch/Rtmp23vvTR’
‘~/tmp/scratch/Rtmp348eJn’ ‘~/tmp/scratch/Rtmp36FNWi’
‘~/tmp/scratch/Rtmp3DBhv8’ ‘~/tmp/scratch/Rtmp3DKopT’
‘~/tmp/scratch/Rtmp3NJE2K’ ‘~/tmp/scratch/Rtmp47t1Lh’
‘~/tmp/scratch/Rtmp4u7GbY’ ‘~/tmp/scratch/Rtmp4y0NuY’
‘~/tmp/scratch/Rtmp5Y2EW5’ ‘~/tmp/scratch/Rtmp6aIdDB’
‘~/tmp/scratch/Rtmp7hAa9p’ ‘~/tmp/scratch/Rtmp82ElQE’
‘~/tmp/scratch/Rtmp889IXj’ ‘~/tmp/scratch/Rtmp8KFmW6’
‘~/tmp/scratch/Rtmp8VHxkO’ ‘~/tmp/scratch/Rtmp8l86Ea’
‘~/tmp/scratch/Rtmp8ws5o0’ ‘~/tmp/scratch/RtmpAZEhqD’
‘~/tmp/scratch/RtmpAZvdo3’ ‘~/tmp/scratch/RtmpBEFVy2’
‘~/tmp/scratch/RtmpBTVyI7’ ‘~/tmp/scratch/RtmpBsn94A’
‘~/tmp/scratch/RtmpCQmxgq’ ‘~/tmp/scratch/RtmpF9fq0r’
‘~/tmp/scratch/RtmpFA0Njh’ ‘~/tmp/scratch/RtmpFfGBp0’
‘~/tmp/scratch/RtmpH2sgfI’ ‘~/tmp/scratch/RtmpHY6LRG’
‘~/tmp/scratch/RtmpI7gIZ4’ ‘~/tmp/scratch/RtmpITzCim’
‘~/tmp/scratch/RtmpIsVq3i’ ‘~/tmp/scratch/RtmpJ1gpAk’
‘~/tmp/scratch/RtmpL8oqA5’ ‘~/tmp/scratch/RtmpMm30gA’
‘~/tmp/scratch/RtmpNNjw4C’ ‘~/tmp/scratch/RtmpNtj57e’
‘~/tmp/scratch/RtmpNvKuqi’ ‘~/tmp/scratch/RtmpOC167g’
‘~/tmp/scratch/RtmpOLqZn3’ ‘~/tmp/scratch/RtmpONcZU5’
‘~/tmp/scratch/RtmpOOp1gl’ ‘~/tmp/scratch/RtmpOWKSsz’
‘~/tmp/scratch/RtmpP7CkEl’ ‘~/tmp/scratch/RtmpPsSCx9’
‘~/tmp/scratch/RtmpQFsAvr’ ‘~/tmp/scratch/RtmpQZBpxB’
‘~/tmp/scratch/RtmpQdbORi’ ‘~/tmp/scratch/RtmpQiC3QA’
‘~/tmp/scratch/RtmpSGoaNw’ ‘~/tmp/scratch/RtmpSkdVKh’
‘~/tmp/scratch/RtmpT1h0jT’ ‘~/tmp/scratch/RtmpTRg7qW’
‘~/tmp/scratch/RtmpTtOh26’ ‘~/tmp/scratch/RtmpTv3w1a’
‘~/tmp/scratch/RtmpUNN5M3’ ‘~/tmp/scratch/RtmpUfmvih’
‘~/tmp/scratch/RtmpV3usxg’ ‘~/tmp/scratch/RtmpV444NZ’
‘~/tmp/scratch/RtmpV7LXyy’ ‘~/tmp/scratch/RtmpVQAZS5’
‘~/tmp/scratch/RtmpVuTXS1’ ‘~/tmp/scratch/RtmpWiG6zE’
‘~/tmp/scratch/RtmpWiR5Uq’ ‘~/tmp/scratch/RtmpWvqa40’
‘~/tmp/scratch/RtmpWyj7ik’ ‘~/tmp/scratch/RtmpYDriQz’
‘~/tmp/scratch/RtmpZ59ueH’ ‘~/tmp/scratch/RtmpZDelk7’
‘~/tmp/scratch/RtmpZyeboo’ ‘~/tmp/scratch/RtmpaD9oAp’
‘~/tmp/scratch/RtmpafK8Js’ ‘~/tmp/scratch/Rtmpai1uyG’
‘~/tmp/scratch/Rtmpb7mEqA’ ‘~/tmp/scratch/RtmpbJPIm6’
‘~/tmp/scratch/RtmpbZolNx’ ‘~/tmp/scratch/RtmpcCyFxO’
‘~/tmp/scratch/RtmpchujXw’ ‘~/tmp/scratch/RtmpdDFmv3’
‘~/tmp/scratch/RtmpdSZlJ3’ ‘~/tmp/scratch/RtmpduSBnp’
‘~/tmp/scratch/RtmpeKYNFT’ ‘~/tmp/scratch/Rtmpf2iYOS’
‘~/tmp/scratch/RtmpfFGWVc’ ‘~/tmp/scratch/RtmpfawEIS’
‘~/tmp/scratch/Rtmph7K0th’ ‘~/tmp/scratch/Rtmpi7qwbA’
‘~/tmp/scratch/RtmpihIVqX’ ‘~/tmp/scratch/RtmpjJEOkd’
‘~/tmp/scratch/RtmpjnK1ZE’ ‘~/tmp/scratch/Rtmpjxscsk’
‘~/tmp/scratch/RtmpkTOkMx’ ‘~/tmp/scratch/RtmpkcRJlc’
‘~/tmp/scratch/RtmpkvKOUN’ ‘~/tmp/scratch/Rtmpm2ARTC’
‘~/tmp/scratch/Rtmpme64Eb’ ‘~/tmp/scratch/RtmpmxKEQc’
‘~/tmp/scratch/Rtmpn5Afan’ ‘~/tmp/scratch/RtmpnjEi3m’
‘~/tmp/scratch/RtmpnmxgX2’ ‘~/tmp/scratch/RtmpoeyLYQ’
‘~/tmp/scratch/Rtmppmyk5B’ ‘~/tmp/scratch/RtmpqXbEfK’
‘~/tmp/scratch/RtmpqfaM28’ ‘~/tmp/scratch/RtmprducbW’
‘~/tmp/scratch/Rtmps3wejy’ ‘~/tmp/scratch/Rtmpse9mck’
‘~/tmp/scratch/Rtmpsl9Q9M’ ‘~/tmp/scratch/Rtmpu3qVhC’
‘~/tmp/scratch/RtmpuFOc5q’ ‘~/tmp/scratch/RtmpulH10Y’
‘~/tmp/scratch/Rtmpumx4V7’ ‘~/tmp/scratch/RtmpvR6Kfg’
‘~/tmp/scratch/Rtmpw1XLBl’ ‘~/tmp/scratch/RtmpwVs7nY’
‘~/tmp/scratch/Rtmpwvk0Mn’ ‘~/tmp/scratch/RtmpxnrzGZ’
‘~/tmp/scratch/RtmpxpGInV’ ‘~/tmp/scratch/RtmpxuFwQB’
‘~/tmp/scratch/Rtmpyg9pN5’ ‘~/tmp/scratch/RtmpzWfndN’
‘~/tmp/scratch/Rtmpzadxd9’ ‘~/tmp/scratch/RtmpzcOYjJ’
‘~/tmp/scratch/RtmpzdeIJt’ ‘~/tmp/scratch/Rtmpzfk4sR’
‘~/tmp/scratch/Rtmpzs8Eve’ ‘~/tmp/scratch/RtmpzsphGF’
‘~/tmp/scratch/ccDlyoRF.s’
‘~/tmp/scratch/quarto-sessione48a53feec0e950d’
‘~/tmp/scratch/xvfb-run.0c5ZYB’ ‘~/tmp/scratch/xvfb-run.2BLZk8’
‘~/tmp/scratch/xvfb-run.2aVkKe’ ‘~/tmp/scratch/xvfb-run.3EHB0O’
‘~/tmp/scratch/xvfb-run.3FFG1L’ ‘~/tmp/scratch/xvfb-run.4PFFmC’
‘~/tmp/scratch/xvfb-run.5D2XvI’ ‘~/tmp/scratch/xvfb-run.6hTk0U’
‘~/tmp/scratch/xvfb-run.7BM5dV’ ‘~/tmp/scratch/xvfb-run.7zScUh’
‘~/tmp/scratch/xvfb-run.9h13qm’ ‘~/tmp/scratch/xvfb-run.ALbGw9’
‘~/tmp/scratch/xvfb-run.B1Ryl3’ ‘~/tmp/scratch/xvfb-run.Bewcgj’
‘~/tmp/scratch/xvfb-run.BgfzW3’ ‘~/tmp/scratch/xvfb-run.C1lmlc’
‘~/tmp/scratch/xvfb-run.C2DmJH’ ‘~/tmp/scratch/xvfb-run.CRTlOe’
‘~/tmp/scratch/xvfb-run.DxquDk’ ‘~/tmp/scratch/xvfb-run.EzMnVS’
‘~/tmp/scratch/xvfb-run.GuwkMF’ ‘~/tmp/scratch/xvfb-run.HVZ6ME’
‘~/tmp/scratch/xvfb-run.HkactV’ ‘~/tmp/scratch/xvfb-run.IPuUgD’
‘~/tmp/scratch/xvfb-run.LzuSm8’ ‘~/tmp/scratch/xvfb-run.MHUP3c’
‘~/tmp/scratch/xvfb-run.RZGSSq’ ‘~/tmp/scratch/xvfb-run.SmRg5u’
‘~/tmp/scratch/xvfb-run.TGkkxC’ ‘~/tmp/scratch/xvfb-run.Tryfxy’
‘~/tmp/scratch/xvfb-run.UW4AaN’ ‘~/tmp/scratch/xvfb-run.YT9Wfz’
‘~/tmp/scratch/xvfb-run.ZU5dce’ ‘~/tmp/scratch/xvfb-run.cG45AU’
‘~/tmp/scratch/xvfb-run.cIIqIb’ ‘~/tmp/scratch/xvfb-run.d9SQSR’
‘~/tmp/scratch/xvfb-run.dZRSjh’ ‘~/tmp/scratch/xvfb-run.fTJg54’
‘~/tmp/scratch/xvfb-run.faM3IA’ ‘~/tmp/scratch/xvfb-run.fnd6So’
‘~/tmp/scratch/xvfb-run.gQ3zSi’ ‘~/tmp/scratch/xvfb-run.glucET’
‘~/tmp/scratch/xvfb-run.hlwLvA’ ‘~/tmp/scratch/xvfb-run.j4ehdE’
‘~/tmp/scratch/xvfb-run.j50ZLf’ ‘~/tmp/scratch/xvfb-run.nLnKRd’
‘~/tmp/scratch/xvfb-run.nzyYvU’ ‘~/tmp/scratch/xvfb-run.osxZBG’
‘~/tmp/scratch/xvfb-run.qdEoBh’ ‘~/tmp/scratch/xvfb-run.tdN2RY’
‘~/tmp/scratch/xvfb-run.tge1A5’ ‘~/tmp/scratch/xvfb-run.uFERl7’
‘~/tmp/scratch/xvfb-run.v1BmfX’ ‘~/tmp/scratch/xvfb-run.vEWs7S’
‘~/tmp/scratch/xvfb-run.vKUAKA’ ‘~/tmp/scratch/xvfb-run.vZl05v’
‘~/tmp/scratch/xvfb-run.yoTMdM’
Flavor: r-devel-linux-x86_64-debian-gcc