CRAN Package Check Results for Package biodosetools

Last updated on 2026-08-04 02:50:26 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.7.2 21.03 250.99 272.02 ERROR
r-devel-linux-x86_64-debian-gcc 3.7.2 14.98 184.98 199.96 ERROR
r-devel-linux-x86_64-fedora-clang 3.7.2 36.00 392.83 428.83 ERROR
r-devel-linux-x86_64-fedora-gcc 3.7.2 15.00 172.08 187.08 OK
r-devel-windows-x86_64 3.7.2 23.00 237.00 260.00 ERROR
r-patched-linux-x86_64 3.7.2 22.60 235.74 258.34 ERROR
r-release-linux-x86_64 3.7.2 21.41 241.35 262.76 ERROR
r-release-macos-arm64 3.7.2 5.00 61.00 66.00 OK
r-release-macos-x86_64 3.7.2 14.00 344.00 358.00 OK
r-release-windows-x86_64 3.7.2 25.00 245.00 270.00 ERROR
r-oldrel-macos-arm64 3.7.2 5.00 65.00 70.00 OK
r-oldrel-macos-x86_64 3.7.2 15.00 289.00 304.00 OK
r-oldrel-windows-x86_64 3.7.2 31.00 342.00 373.00 ERROR

Check Details

Version: 3.7.2
Check: tests
Result: ERROR Running ‘testthat.R’ [21s/29s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(biodosetools) Loading required package: shiny Loading required package: golem > > test_check("biodosetools") ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 Saving _problems/test-golem-recommended-49.R ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:71:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 3.7.2
Check: tests
Result: ERROR Running ‘testthat.R’ [17s/24s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(biodosetools) Loading required package: shiny Loading required package: golem > > test_check("biodosetools") ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 Saving _problems/test-golem-recommended-49.R ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:71:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.7.2
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0QQgwN’ ‘~/tmp/scratch/Rtmp0ToZlc’ ‘~/tmp/scratch/Rtmp0vhfdX’ ‘~/tmp/scratch/Rtmp1G0xEc’ ‘~/tmp/scratch/Rtmp1Rkf5h’ ‘~/tmp/scratch/Rtmp1YrO79’ ‘~/tmp/scratch/Rtmp1uIbuK’ ‘~/tmp/scratch/Rtmp1uxfKk’ ‘~/tmp/scratch/Rtmp1uyVPk’ ‘~/tmp/scratch/Rtmp2D41jQ’ ‘~/tmp/scratch/Rtmp2hf6jR’ ‘~/tmp/scratch/Rtmp2vb6I5’ ‘~/tmp/scratch/Rtmp3OTMWz’ ‘~/tmp/scratch/Rtmp3t9IuJ’ ‘~/tmp/scratch/Rtmp4bwLxb’ ‘~/tmp/scratch/Rtmp4tkWGN’ ‘~/tmp/scratch/Rtmp5hELn6’ ‘~/tmp/scratch/Rtmp5iPSY0’ ‘~/tmp/scratch/Rtmp5odrK0’ ‘~/tmp/scratch/Rtmp5vUowu’ ‘~/tmp/scratch/Rtmp61ljLc’ ‘~/tmp/scratch/Rtmp6OuVfF’ ‘~/tmp/scratch/Rtmp6aD0G6’ ‘~/tmp/scratch/Rtmp6bDbK1’ ‘~/tmp/scratch/Rtmp6or5PB’ ‘~/tmp/scratch/Rtmp6qRtLq’ ‘~/tmp/scratch/Rtmp70uHUN’ ‘~/tmp/scratch/Rtmp7BZNhP’ ‘~/tmp/scratch/Rtmp8EFexx’ ‘~/tmp/scratch/Rtmp8TQ2eV’ ‘~/tmp/scratch/Rtmp8vW4cJ’ ‘~/tmp/scratch/Rtmp8ve04d’ ‘~/tmp/scratch/Rtmp9Fuv2B’ ‘~/tmp/scratch/Rtmp9HEa92’ ‘~/tmp/scratch/Rtmp9J82EN’ 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‘~/tmp/scratch/Rtmpcmlab3’ ‘~/tmp/scratch/Rtmpct8T9Z’ ‘~/tmp/scratch/RtmpcyqjJ6’ ‘~/tmp/scratch/RtmpdA6xPu’ ‘~/tmp/scratch/RtmpdXIZoT’ ‘~/tmp/scratch/Rtmpdzjg7N’ ‘~/tmp/scratch/RtmpeXKvxc’ ‘~/tmp/scratch/Rtmpef3WcN’ ‘~/tmp/scratch/RtmpekARkm’ ‘~/tmp/scratch/RtmpemkGaQ’ ‘~/tmp/scratch/RtmpfOtPef’ ‘~/tmp/scratch/Rtmpflq5qO’ ‘~/tmp/scratch/Rtmpfvcs2l’ ‘~/tmp/scratch/RtmpgH0WHm’ ‘~/tmp/scratch/RtmpgHfMNE’ ‘~/tmp/scratch/RtmpgQTj6z’ ‘~/tmp/scratch/RtmpgS4Us2’ ‘~/tmp/scratch/RtmpgpXpVy’ ‘~/tmp/scratch/RtmphGFEkK’ ‘~/tmp/scratch/Rtmphqa5m6’ ‘~/tmp/scratch/RtmpjCpAL3’ ‘~/tmp/scratch/RtmpjEceB0’ ‘~/tmp/scratch/RtmpjKBgZL’ ‘~/tmp/scratch/RtmpkdYFwW’ ‘~/tmp/scratch/RtmpkeizB0’ ‘~/tmp/scratch/RtmpkhWSP2’ ‘~/tmp/scratch/RtmplJFqhg’ ‘~/tmp/scratch/RtmpliqCMT’ ‘~/tmp/scratch/RtmpmFMYot’ ‘~/tmp/scratch/RtmpmG9ppi’ ‘~/tmp/scratch/RtmpmZnYSK’ ‘~/tmp/scratch/RtmpmfJkWy’ ‘~/tmp/scratch/Rtmpn5bztI’ ‘~/tmp/scratch/RtmpnP8wX1’ ‘~/tmp/scratch/RtmpndCG76’ ‘~/tmp/scratch/Rtmpnp5ial’ ‘~/tmp/scratch/Rtmpo8kCPk’ 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‘~/tmp/scratch/xvfb-run.YCEmqR’ ‘~/tmp/scratch/xvfb-run.YlW3RX’ ‘~/tmp/scratch/xvfb-run.YuEpzg’ ‘~/tmp/scratch/xvfb-run.ZrAmsp’ ‘~/tmp/scratch/xvfb-run.aQTieh’ ‘~/tmp/scratch/xvfb-run.auZkk6’ ‘~/tmp/scratch/xvfb-run.bQoSdx’ ‘~/tmp/scratch/xvfb-run.bcvijb’ ‘~/tmp/scratch/xvfb-run.bmzUQr’ ‘~/tmp/scratch/xvfb-run.buvIZp’ ‘~/tmp/scratch/xvfb-run.bxHKYv’ ‘~/tmp/scratch/xvfb-run.cLeRxR’ ‘~/tmp/scratch/xvfb-run.d2hjbf’ ‘~/tmp/scratch/xvfb-run.dxuj1o’ ‘~/tmp/scratch/xvfb-run.ehJEae’ ‘~/tmp/scratch/xvfb-run.fcfF5Z’ ‘~/tmp/scratch/xvfb-run.fvwxB0’ ‘~/tmp/scratch/xvfb-run.gM0meI’ ‘~/tmp/scratch/xvfb-run.gZhvpA’ ‘~/tmp/scratch/xvfb-run.hCovjI’ ‘~/tmp/scratch/xvfb-run.ii6MsP’ ‘~/tmp/scratch/xvfb-run.iqVCRI’ ‘~/tmp/scratch/xvfb-run.jLuyul’ ‘~/tmp/scratch/xvfb-run.jxC9or’ ‘~/tmp/scratch/xvfb-run.kVyFdJ’ ‘~/tmp/scratch/xvfb-run.nCral7’ ‘~/tmp/scratch/xvfb-run.nFdIPe’ ‘~/tmp/scratch/xvfb-run.nJvSmQ’ ‘~/tmp/scratch/xvfb-run.nUkWHf’ ‘~/tmp/scratch/xvfb-run.oqDhTv’ ‘~/tmp/scratch/xvfb-run.pcOP1y’ ‘~/tmp/scratch/xvfb-run.pmEjw6’ ‘~/tmp/scratch/xvfb-run.tbAh4r’ ‘~/tmp/scratch/xvfb-run.tdxXe9’ ‘~/tmp/scratch/xvfb-run.uibVXt’ ‘~/tmp/scratch/xvfb-run.vZ9n9m’ ‘~/tmp/scratch/xvfb-run.w3v5Mr’ ‘~/tmp/scratch/xvfb-run.wcvSW5’ ‘~/tmp/scratch/xvfb-run.wq4QjS’ ‘~/tmp/scratch/xvfb-run.xMSEG3’ ‘~/tmp/scratch/xvfb-run.ypsxdp’ ‘/dev/shm/7f12acc5-a951-446b-8e09-aa988b7d75d5’ ‘/dev/shm/7f12acc5-a951-446b-8e09-aa988b7d75d5_counter’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.7.2
Check: tests
Result: ERROR Running ‘testthat.R’ [34s/41s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(biodosetools) Loading required package: shiny Loading required package: golem > > test_check("biodosetools") ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 Saving _problems/test-golem-recommended-49.R ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:71:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.7.2
Check: tests
Result: ERROR Running 'testthat.R' [19s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(biodosetools) Loading required package: shiny Loading required package: golem > > test_check("biodosetools") ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 Saving _problems/test-golem-recommended-49.R ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:71:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] Error: ! Test failures. Execution halted Flavors: r-devel-windows-x86_64, r-release-windows-x86_64

Version: 3.7.2
Check: tests
Result: ERROR Running ‘testthat.R’ [21s/31s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(biodosetools) Loading required package: shiny Loading required package: golem > > test_check("biodosetools") ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 Saving _problems/test-golem-recommended-49.R ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:71:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] Error: ! Test failures. Execution halted Flavor: r-patched-linux-x86_64

Version: 3.7.2
Check: tests
Result: ERROR Running ‘testthat.R’ [21s/28s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(biodosetools) Loading required package: shiny Loading required package: golem > > test_check("biodosetools") ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 Saving _problems/test-golem-recommended-49.R ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:71:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] Error: ! Test failures. Execution halted Flavor: r-release-linux-x86_64

Version: 3.7.2
Check: tests
Result: ERROR Running 'testthat.R' [29s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(biodosetools) Loading required package: shiny Loading required package: golem > > test_check("biodosetools") ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 Saving _problems/test-golem-recommended-49.R ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead number of iterations= 43 ! Problem with `glm()` -> constraint ML optimization will be used instead ! Problem with `glm()` -> constraint ML optimization will be used instead [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:71:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-windows-x86_64