Last updated on 2026-08-04 02:50:27 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4.0 | 3.57 | 121.19 | 124.76 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.4.0 | 2.90 | 89.22 | 92.12 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.4.0 | 197.14 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4.0 | 86.82 | NOTE | |||
| r-devel-windows-x86_64 | 0.4.0 | 6.00 | 98.00 | 104.00 | ERROR | |
| r-patched-linux-x86_64 | 0.4.0 | 4.40 | 117.65 | 122.05 | OK | |
| r-release-linux-x86_64 | 0.4.0 | 3.15 | 117.79 | 120.94 | OK | |
| r-release-macos-arm64 | 0.4.0 | 1.00 | 36.00 | 37.00 | OK | |
| r-release-macos-x86_64 | 0.4.0 | 3.00 | 138.00 | 141.00 | OK | |
| r-release-windows-x86_64 | 0.4.0 | 6.00 | 152.00 | 158.00 | OK | |
| r-oldrel-macos-arm64 | 0.4.0 | 1.00 | 46.00 | 47.00 | OK | |
| r-oldrel-macos-x86_64 | 0.4.0 | 3.00 | 141.00 | 144.00 | OK | |
| r-oldrel-windows-x86_64 | 0.4.0 | 7.00 | 204.00 | 211.00 | OK |
Version: 0.4.0
Check: R code for possible problems
Result: NOTE
Found calls to structure() using deprecated special names:
butcher/tests/testthat/test-multnet.R (.Label: 1)
butcher/tests/testthat/test-randomForest.R (.Label: 1)
butcher/tests/testthat/test-train.R (.Label: 1)
'.Label' should be changed to 'levels'.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 0.4.0
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp05sYnV’ ‘~/tmp/scratch/Rtmp0Ndlji’
‘~/tmp/scratch/Rtmp0Rhxwy’ ‘~/tmp/scratch/Rtmp0Zd4a0’
‘~/tmp/scratch/Rtmp0t3WzB’ ‘~/tmp/scratch/Rtmp17aWwP’
‘~/tmp/scratch/Rtmp1WMxqZ’ ‘~/tmp/scratch/Rtmp1hNAjR’
‘~/tmp/scratch/Rtmp24rWAe’ ‘~/tmp/scratch/Rtmp26Q5G1’
‘~/tmp/scratch/Rtmp2zMfGB’ ‘~/tmp/scratch/Rtmp395GR3’
‘~/tmp/scratch/Rtmp4SxXKs’ ‘~/tmp/scratch/Rtmp4vqsdw’
‘~/tmp/scratch/Rtmp5Ohicb’ ‘~/tmp/scratch/Rtmp5m3yuH’
‘~/tmp/scratch/Rtmp62MnUU’ ‘~/tmp/scratch/Rtmp69Pntw’
‘~/tmp/scratch/Rtmp6MwjVd’ ‘~/tmp/scratch/Rtmp6UgXuZ’
‘~/tmp/scratch/Rtmp6vVdBq’ ‘~/tmp/scratch/Rtmp7WV4IO’
‘~/tmp/scratch/Rtmp87o4lC’ ‘~/tmp/scratch/Rtmp8drE8R’
‘~/tmp/scratch/Rtmp96Vdey’ ‘~/tmp/scratch/Rtmp9KieKV’
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‘~/tmp/scratch/RtmpBdoTg9’ ‘~/tmp/scratch/RtmpCXwCmh’
‘~/tmp/scratch/RtmpD37S1f’ ‘~/tmp/scratch/RtmpD4tsfj’
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‘~/tmp/scratch/RtmpFJWXDt’ ‘~/tmp/scratch/RtmpFPH6gt’
‘~/tmp/scratch/RtmpFZKjCk’ ‘~/tmp/scratch/RtmpFeZUJb’
‘~/tmp/scratch/RtmpFta5Ho’ ‘~/tmp/scratch/RtmpGFEvNV’
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‘~/tmp/scratch/RtmpJLTdj5’ ‘~/tmp/scratch/RtmpJrNXnm’
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‘~/tmp/scratch/RtmpLSKct6’ ‘~/tmp/scratch/RtmpNB5z0y’
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‘~/tmp/scratch/RtmpiJT23c’ ‘~/tmp/scratch/RtmpjOv450’
‘~/tmp/scratch/RtmpjpxSpk’ ‘~/tmp/scratch/RtmpjqBzpB’
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‘~/tmp/scratch/RtmpkOll8M’ ‘~/tmp/scratch/RtmpkPvHeD’
‘~/tmp/scratch/RtmpkocI9t’ ‘~/tmp/scratch/RtmplNsH7n’
‘~/tmp/scratch/RtmplWY1yG’ ‘~/tmp/scratch/Rtmpm87ob2’
‘~/tmp/scratch/RtmpmBThA3’ ‘~/tmp/scratch/RtmpmeDiyn’
‘~/tmp/scratch/RtmpmiKTSZ’ ‘~/tmp/scratch/RtmpnTbxGv’
‘~/tmp/scratch/Rtmpo9LFM3’ ‘~/tmp/scratch/RtmppA7zeu’
‘~/tmp/scratch/Rtmpq0nuAl’ ‘~/tmp/scratch/Rtmpq5tiXz’
‘~/tmp/scratch/RtmpqbjmZo’ ‘~/tmp/scratch/RtmpqwnMjY’
‘~/tmp/scratch/RtmprGOlzH’ ‘~/tmp/scratch/Rtmps8ri25’
‘~/tmp/scratch/RtmpsIvX3R’ ‘~/tmp/scratch/RtmptfapCS’
‘~/tmp/scratch/Rtmptm0oNT’ ‘~/tmp/scratch/RtmptqU6Y5’
‘~/tmp/scratch/Rtmpu6aMt6’ ‘~/tmp/scratch/RtmpuImkQO’
‘~/tmp/scratch/RtmpuJVQa8’ ‘~/tmp/scratch/RtmpuNvAqJ’
‘~/tmp/scratch/RtmpuRUbz3’ ‘~/tmp/scratch/RtmpuTjbqF’
‘~/tmp/scratch/Rtmpub1P19’ ‘~/tmp/scratch/RtmpvNYCBS’
‘~/tmp/scratch/RtmpvdSQ6A’ ‘~/tmp/scratch/RtmpvyaFaJ’
‘~/tmp/scratch/RtmpwVewA4’ ‘~/tmp/scratch/RtmpwqC2An’
‘~/tmp/scratch/RtmpxXxook’ ‘~/tmp/scratch/RtmpyAFsij’
‘~/tmp/scratch/RtmpyMieH3’ ‘~/tmp/scratch/RtmpyTCaZP’
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‘~/tmp/scratch/xvfb-run.zAOIhH’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.0
Check: examples
Result: ERROR
Running examples in 'butcher-Ex.R' failed
The error most likely occurred in:
> ### Name: axe-bart
> ### Title: Axing a bart model.
> ### Aliases: axe-bart axe_call.bart axe_fitted.bart
>
> ### ** Examples
>
> ## Don't show:
> if (rlang::is_installed("dbarts")) withAutoprint({ # examplesIf
+ ## End(Don't show)
+ library(dbarts)
+ x <- dbarts::bart(mtcars[,2:5], mtcars[,1], verbose = FALSE, keeptrees = TRUE)
+ res <- butcher(x, verbose = TRUE)
+ ## Don't show:
+ }) # examplesIf
> library(dbarts)
> x <- dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE, keeptrees = TRUE)
Error in parse(text = deparse(RNGkind)[-1L]) :
<text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Calls: withAutoprint ... validObject -> anyStrings -> isTRUE -> validityMethod -> parse
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.4.0
Check: tests
Result: ERROR
Running 'testthat.R' [18s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(butcher)
>
> test_check("butcher")
Saving _problems/test-bart-5.R
Saving _problems/test-bart-16.R
Saving _problems/test-bart-26.R
Saving _problems/test-bart-39.R
Saving _problems/test-bart-55.R
1 package (dimRed) is needed for this step but is not installed.
To install run: `install.packages("dimRed")`
[ FAIL 5 | WARN 0 | SKIP 44 | PASS 198 ]
══ Skipped tests (44) ══════════════════════════════════════════════════════════
• On CRAN (43): 'test-c5.R:2:3', 'test-earth.R:2:3', 'test-earth.R:31:3',
'test-elnet.R:2:3', 'test-flexsurvreg.R:2:3', 'test-flexsurvreg.R:18:3',
'test-flexsurvreg.R:56:3', 'test-gausspr.R:2:3', 'test-glmnet.R:2:3',
'test-kknn.R:2:3', 'test-klaR.R:2:3', 'test-klaR.R:16:3', 'test-ksvm.R:2:3',
'test-mda.R:2:3', 'test-mda.R:24:3', 'test-mda.R:98:3',
'test-mixOmics.R:2:3', 'test-mixOmics.R:21:3', 'test-mixOmics.R:40:3',
'test-multnet.R:2:3', 'test-new.R:1:1', 'test-nnet.R:2:3',
'test-randomForest.R:2:3', 'test-rpart.R:2:3', 'test-rpart.R:22:3',
'test-rsample.R:1:1', 'test-rsample.R:21:1', 'test-rsample.R:34:1',
'test-rsample.R:55:1', 'test-rsample.R:72:1', 'test-sclass.R:2:3',
'test-survreg.R:2:3', 'test-survreg.penal.R:2:3', 'test-tabnet_fit.R:2:3',
'test-tabnet_fit.R:20:3', 'test-tabnet_fit.R:37:3', 'test-train.R:2:3',
'test-train.R:44:3', 'test-train.recipe.R:9:3', 'test-ui.R:1:1',
'test-weigh.R:1:1', 'test-xgb.R:6:3', 'test-xgb.R:51:3'
• {mixOmics} is not installed (1): 'test-recipe.R:454:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-bart.R:5:3'): dbarts + axe_call() works ────────────────────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE) at test-bart.R:5:3
2. └─dbarts::dbartsControl(...)
3. └─methods::new(...)
4. ├─methods::initialize(value, ...)
5. └─dbarts (local) initialize(value, ...)
6. ├─methods::callNextMethod()
7. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
8. └─methods::validObject(.Object)
9. ├─methods (local) anyStrings(validityMethod(object))
10. │ └─base::isTRUE(x)
11. └─dbarts (local) validityMethod(object)
12. └─base::parse(text = deparse(RNGkind)[-1L])
── Error ('test-bart.R:11:3'): dbarts + axe_fitted() works ─────────────────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], mtcars[1:5, 2:5], verbose = FALSE) at test-bart.R:11:3
2. └─dbarts::dbartsControl(...)
3. └─methods::new(...)
4. ├─methods::initialize(value, ...)
5. └─dbarts (local) initialize(value, ...)
6. ├─methods::callNextMethod()
7. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
8. └─methods::validObject(.Object)
9. ├─methods (local) anyStrings(validityMethod(object))
10. │ └─base::isTRUE(x)
11. └─dbarts (local) validityMethod(object)
12. └─base::parse(text = deparse(RNGkind)[-1L])
── Error ('test-bart.R:26:3'): dbarts + butcher() works ────────────────────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE) at test-bart.R:26:3
2. └─dbarts::dbartsControl(...)
3. └─methods::new(...)
4. ├─methods::initialize(value, ...)
5. └─dbarts (local) initialize(value, ...)
6. ├─methods::callNextMethod()
7. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
8. └─methods::validObject(.Object)
9. ├─methods (local) anyStrings(validityMethod(object))
10. │ └─base::isTRUE(x)
11. └─dbarts (local) validityMethod(object)
12. └─base::parse(text = deparse(RNGkind)[-1L])
── Error ('test-bart.R:34:3'): dbarts + predict() works ────────────────────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE, keeptrees = TRUE) at test-bart.R:34:3
2. └─dbarts::dbartsControl(...)
3. └─methods::new(...)
4. ├─methods::initialize(value, ...)
5. └─dbarts (local) initialize(value, ...)
6. ├─methods::callNextMethod()
7. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
8. └─methods::validObject(.Object)
9. ├─methods (local) anyStrings(validityMethod(object))
10. │ └─base::isTRUE(x)
11. └─dbarts (local) validityMethod(object)
12. └─base::parse(text = deparse(RNGkind)[-1L])
── Error ('test-bart.R:55:3'): bart() from parsnip + predict() works ───────────
Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
1: binom.kind = NULL)
^
Backtrace:
▆
1. ├─generics::fit(spec, mpg ~ ., mtcars) at test-bart.R:55:3
2. ├─parsnip::fit.model_spec(spec, mpg ~ ., mtcars)
3. │ └─parsnip:::form_xy(...)
4. │ └─parsnip:::xy_xy(...)
5. │ └─parsnip:::eval_mod(...)
6. │ └─rlang::eval_tidy(e, env = envir, ...)
7. └─dbarts::bart(...)
8. └─dbarts::dbartsControl(...)
9. └─methods::new(...)
10. ├─methods::initialize(value, ...)
11. └─dbarts (local) initialize(value, ...)
12. ├─methods::callNextMethod()
13. └─methods (local) .nextMethod(.Object = .Object, ... = ...)
14. └─methods::validObject(.Object)
15. ├─methods (local) anyStrings(validityMethod(object))
16. │ └─base::isTRUE(x)
17. └─dbarts (local) validityMethod(object)
18. └─base::parse(text = deparse(RNGkind)[-1L])
[ FAIL 5 | WARN 0 | SKIP 44 | PASS 198 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64