Last updated on 2026-08-04 02:50:34 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.42.2 | 15.00 | 154.52 | 169.52 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.42.2 | 12.28 | 116.21 | 128.49 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.42.2 | 25.00 | 245.18 | 270.18 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 1.42.2 | 11.00 | 104.91 | 115.91 | NOTE | |
| r-devel-windows-x86_64 | 1.42.2 | 19.00 | 173.00 | 192.00 | NOTE | |
| r-patched-linux-x86_64 | 1.42.2 | 15.69 | 144.64 | 160.33 | NOTE | |
| r-release-linux-x86_64 | 1.42.2 | 14.04 | 144.18 | 158.22 | NOTE | |
| r-release-macos-arm64 | 1.42.2 | 4.00 | 33.00 | 37.00 | NOTE | |
| r-release-macos-x86_64 | 1.42.2 | 11.00 | 112.00 | 123.00 | ERROR | |
| r-release-windows-x86_64 | 1.42.2 | 21.00 | 178.00 | 199.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.42.2 | ERROR | ||||
| r-oldrel-macos-x86_64 | 1.42.2 | 9.00 | 83.00 | 92.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.42.2 | 26.00 | 235.00 | 261.00 | NOTE |
Version: 1.42.2
Check: Rd files
Result: NOTE
checkRd: (-1) dkprofile.Rd:64: Lost braces
64 | \doi{10.3389/fphys.2017.00524}{Thiery et al. (2017)}
| ^
checkRd: (-1) dne.Rd:45: Lost braces
45 | \doi{10.1002/ajpa.21489}{Bunn et al. (2011)}
| ^
checkRd: (-1) dne.Rd:47: Lost braces
47 | \doi{10.1007/s10914-016-9326-0}{Pampush et al. (2016)}
| ^
checkRd: (-1) inclin.Rd:28: Lost braces
28 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) oedist.Rd:43: Lost braces
43 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) oedist.Rd:45: Lost braces
45 | \doi{10.1371/journal.pone.0138802}{Guy et al. (2015)}
| ^
checkRd: (-1) oedist.Rd:47: Lost braces
47 | \doi{10.3389/fphys.2017.00524}{Thiery et al. (2017)}
| ^
checkRd: (-1) oedist.Rd:49: Lost braces
49 | \doi{10.1098/rsbl.2019.0671}{Schwartz et al. (2020)}
| ^
checkRd: (-1) opc.Rd:36: Lost braces
36 | \doi{10.1038/nature05433}{Evans et al. (2007)}
| ^
checkRd: (-1) opcr.Rd:30: Lost braces
30 | \doi{10.1038/nature10880}{Wilson et al. (2012)}
| ^
checkRd: (-1) rfi.Rd:34: Lost braces
34 | \doi{10.1016/j.jhevol.2008.08.002}{Boyer (2008)}
| ^
checkRd: (-1) rfi.Rd:35: Lost braces
35 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) rrate.Rd:34: Lost braces
34 | \doi{10.1002/ajpa.23916}{Thiery et al. (2019)}
| ^
checkRd: (-1) shape.index.Rd:44: Lost braces
44 | \doi{10.1029/TR013i001p00350}{Horton (1932)}
| ^
checkRd: (-1) shape.index.Rd:46: Lost braces
46 | \doi{10.1130/0016-7606(1956)67[597:EODSAS]2.0.CO;2}{Schumm (1956)}
| ^
checkRd: (-1) shape.index.Rd:48: Lost braces
48 | \doi{10.2475/ajs.255.2.138}{Chorley et al. (1957)}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.42.2
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0Dxuex’ ‘~/tmp/scratch/Rtmp0LTJwt’
‘~/tmp/scratch/Rtmp0gZSZc’ ‘~/tmp/scratch/Rtmp17iMEh’
‘~/tmp/scratch/Rtmp1DxCSo’ ‘~/tmp/scratch/Rtmp1VrkCa’
‘~/tmp/scratch/Rtmp1eycXN’ ‘~/tmp/scratch/Rtmp1gN6u6’
‘~/tmp/scratch/Rtmp1v6G3w’ ‘~/tmp/scratch/Rtmp2zCYf9’
‘~/tmp/scratch/Rtmp3zwrkM’ ‘~/tmp/scratch/Rtmp4IRFLi’
‘~/tmp/scratch/Rtmp4e6J3F’ ‘~/tmp/scratch/Rtmp4kUQW0’
‘~/tmp/scratch/Rtmp4nPmb3’ ‘~/tmp/scratch/Rtmp520fGA’
‘~/tmp/scratch/Rtmp66oKBL’ ‘~/tmp/scratch/Rtmp6LVaaO’
‘~/tmp/scratch/Rtmp6RDdY4’ ‘~/tmp/scratch/Rtmp6a3NZD’
‘~/tmp/scratch/Rtmp78i1qe’ ‘~/tmp/scratch/Rtmp79A3h3’
‘~/tmp/scratch/Rtmp7B8pUX’ ‘~/tmp/scratch/Rtmp7EAjlW’
‘~/tmp/scratch/Rtmp7xBvEr’ ‘~/tmp/scratch/Rtmp898UdZ’
‘~/tmp/scratch/Rtmp8Q5VNk’ ‘~/tmp/scratch/Rtmp8mywoS’
‘~/tmp/scratch/Rtmp8qrsTt’ ‘~/tmp/scratch/Rtmp9EYGlr’
‘~/tmp/scratch/Rtmp9iN4Mk’ ‘~/tmp/scratch/Rtmp9pCyj8’
‘~/tmp/scratch/RtmpAvK8HG’ ‘~/tmp/scratch/RtmpBWbPGc’
‘~/tmp/scratch/RtmpBdui3q’ ‘~/tmp/scratch/RtmpC0RagP’
‘~/tmp/scratch/RtmpC9DWU4’ ‘~/tmp/scratch/RtmpDSJTOu’
‘~/tmp/scratch/RtmpDw5ZWq’ ‘~/tmp/scratch/RtmpEOctt5’
‘~/tmp/scratch/RtmpEnTzx3’ ‘~/tmp/scratch/RtmpGGGpCW’
‘~/tmp/scratch/RtmpH02ciu’ ‘~/tmp/scratch/RtmpH1qq20’
‘~/tmp/scratch/RtmpHFM6vN’ ‘~/tmp/scratch/RtmpHVYwwp’
‘~/tmp/scratch/RtmpHjDfE6’ ‘~/tmp/scratch/RtmpIGo0sH’
‘~/tmp/scratch/RtmpInLp6m’ ‘~/tmp/scratch/RtmpKW1vrO’
‘~/tmp/scratch/RtmpM1pu4i’ ‘~/tmp/scratch/RtmpNYyoFR’
‘~/tmp/scratch/RtmpNgWXYt’ ‘~/tmp/scratch/RtmpNi0GfH’
‘~/tmp/scratch/RtmpNtIh0H’ ‘~/tmp/scratch/RtmpODVpzk’
‘~/tmp/scratch/RtmpOvjz2O’ ‘~/tmp/scratch/RtmpOxW5VW’
‘~/tmp/scratch/RtmpPnf1ce’ ‘~/tmp/scratch/RtmpQ6hWU1’
‘~/tmp/scratch/RtmpQDVWuW’ ‘~/tmp/scratch/RtmpQNe9qn’
‘~/tmp/scratch/RtmpQjunos’ ‘~/tmp/scratch/RtmpQojek3’
‘~/tmp/scratch/RtmpRCbAKh’ ‘~/tmp/scratch/RtmpRrS6wI’
‘~/tmp/scratch/RtmpSXRhfS’ ‘~/tmp/scratch/RtmpSf9BGW’
‘~/tmp/scratch/RtmpSjWsvo’ ‘~/tmp/scratch/RtmpSmm4av’
‘~/tmp/scratch/RtmpURk5Hs’ ‘~/tmp/scratch/RtmpUirk98’
‘~/tmp/scratch/RtmpVKXnUm’ ‘~/tmp/scratch/RtmpVMUjyr’
‘~/tmp/scratch/RtmpVQlFvG’ ‘~/tmp/scratch/RtmpVVyWDz’
‘~/tmp/scratch/RtmpWBc2vn’ ‘~/tmp/scratch/RtmpWHQ4bL’
‘~/tmp/scratch/RtmpWPbN3s’ ‘~/tmp/scratch/RtmpWjrCFQ’
‘~/tmp/scratch/RtmpWsIynq’ ‘~/tmp/scratch/RtmpX0AbIw’
‘~/tmp/scratch/RtmpXETzrK’ ‘~/tmp/scratch/RtmpXOLkI8’
‘~/tmp/scratch/RtmpXc8bjJ’ ‘~/tmp/scratch/RtmpXsJKLh’
‘~/tmp/scratch/RtmpYB4tSa’ ‘~/tmp/scratch/RtmpYBCrPE’
‘~/tmp/scratch/RtmpYHbCqt’ ‘~/tmp/scratch/RtmpYxFetw’
‘~/tmp/scratch/RtmpZPKorc’ ‘~/tmp/scratch/RtmpZtbhEq’
‘~/tmp/scratch/RtmpaiHdUM’ ‘~/tmp/scratch/Rtmpbyb9BC’
‘~/tmp/scratch/Rtmpc6ohtg’ ‘~/tmp/scratch/RtmpcIa9LL’
‘~/tmp/scratch/RtmpcReBQR’ ‘~/tmp/scratch/RtmpcpQHf0’
‘~/tmp/scratch/Rtmpd31uta’ ‘~/tmp/scratch/RtmpdCzndn’
‘~/tmp/scratch/RtmpdFnMVv’ ‘~/tmp/scratch/RtmpdK2uwh’
‘~/tmp/scratch/RtmpdRx7Dm’ ‘~/tmp/scratch/Rtmpe7u0Bm’
‘~/tmp/scratch/Rtmpegai4n’ ‘~/tmp/scratch/RtmpernKBA’
‘~/tmp/scratch/Rtmpf9WXBw’ ‘~/tmp/scratch/RtmpfCVA53’
‘~/tmp/scratch/RtmpfgghFj’ ‘~/tmp/scratch/RtmpgAAT9N’
‘~/tmp/scratch/RtmpgKy13O’ ‘~/tmp/scratch/RtmphxR6g3’
‘~/tmp/scratch/RtmphzJzsP’ ‘~/tmp/scratch/Rtmpik9mBj’
‘~/tmp/scratch/Rtmpip09uj’ ‘~/tmp/scratch/RtmpiwL0Gv’
‘~/tmp/scratch/Rtmpj6OODr’ ‘~/tmp/scratch/RtmpjFywOq’
‘~/tmp/scratch/Rtmpjdiuvq’ ‘~/tmp/scratch/Rtmpjl0syV’
‘~/tmp/scratch/Rtmpju3Dtq’ ‘~/tmp/scratch/RtmpkQr0JX’
‘~/tmp/scratch/RtmpkW5dSF’ ‘~/tmp/scratch/Rtmpkc3R7I’
‘~/tmp/scratch/Rtmpl3nVOD’ ‘~/tmp/scratch/Rtmpl6bR4m’
‘~/tmp/scratch/RtmpllSgJH’ ‘~/tmp/scratch/RtmploRRkK’
‘~/tmp/scratch/Rtmplsssmj’ ‘~/tmp/scratch/RtmpmTMEjO’
‘~/tmp/scratch/Rtmpn3B73f’ ‘~/tmp/scratch/RtmpnyCLaw’
‘~/tmp/scratch/RtmpoPmuL6’ ‘~/tmp/scratch/RtmppUedjx’
‘~/tmp/scratch/RtmppjnsXU’ ‘~/tmp/scratch/RtmpplduZr’
‘~/tmp/scratch/RtmpqoUKLY’ ‘~/tmp/scratch/RtmprcakKu’
‘~/tmp/scratch/RtmprvvpyN’ ‘~/tmp/scratch/Rtmps8Oynw’
‘~/tmp/scratch/RtmpsJEaX6’ ‘~/tmp/scratch/RtmpsKejiT’
‘~/tmp/scratch/RtmpspYosy’ ‘~/tmp/scratch/Rtmptd9pLI’
‘~/tmp/scratch/RtmptfoafX’ ‘~/tmp/scratch/RtmpuOztDK’
‘~/tmp/scratch/RtmpuUchhj’ ‘~/tmp/scratch/RtmputCVdU’
‘~/tmp/scratch/Rtmpv5y8Ls’ ‘~/tmp/scratch/RtmpvC2PaP’
‘~/tmp/scratch/RtmpvWFotj’ ‘~/tmp/scratch/RtmpwE1kmt’
‘~/tmp/scratch/RtmpwwZpiu’ ‘~/tmp/scratch/RtmpxMZv6w’
‘~/tmp/scratch/RtmpxmRwV0’ ‘~/tmp/scratch/RtmpxxrqCA’
‘~/tmp/scratch/RtmpzmGxvr’ ‘~/tmp/scratch/RtmpzmKC39’
‘~/tmp/scratch/quarto-session4ffa131c4edb30a8’
‘~/tmp/scratch/xvfb-run.063qCM’ ‘~/tmp/scratch/xvfb-run.07uR2U’
‘~/tmp/scratch/xvfb-run.0s0k2C’ ‘~/tmp/scratch/xvfb-run.190KNz’
‘~/tmp/scratch/xvfb-run.1TbF7N’ ‘~/tmp/scratch/xvfb-run.1bWwWw’
‘~/tmp/scratch/xvfb-run.3mqWoq’ ‘~/tmp/scratch/xvfb-run.6VsZZ1’
‘~/tmp/scratch/xvfb-run.6hiqnu’ ‘~/tmp/scratch/xvfb-run.6loazd’
‘~/tmp/scratch/xvfb-run.8wiLBe’ ‘~/tmp/scratch/xvfb-run.AcVvv7’
‘~/tmp/scratch/xvfb-run.AdlvX4’ ‘~/tmp/scratch/xvfb-run.B0X2bv’
‘~/tmp/scratch/xvfb-run.CiLbwZ’ ‘~/tmp/scratch/xvfb-run.D3CcRI’
‘~/tmp/scratch/xvfb-run.DdDlwd’ ‘~/tmp/scratch/xvfb-run.F7lHof’
‘~/tmp/scratch/xvfb-run.FREtUw’ ‘~/tmp/scratch/xvfb-run.I8u39T’
‘~/tmp/scratch/xvfb-run.IalExB’ ‘~/tmp/scratch/xvfb-run.JZlKPf’
‘~/tmp/scratch/xvfb-run.KElhW7’ ‘~/tmp/scratch/xvfb-run.L90pHr’
‘~/tmp/scratch/xvfb-run.MekNU0’ ‘~/tmp/scratch/xvfb-run.NEhnAV’
‘~/tmp/scratch/xvfb-run.Nt05lw’ ‘~/tmp/scratch/xvfb-run.O8nwfG’
‘~/tmp/scratch/xvfb-run.OTyG3B’ ‘~/tmp/scratch/xvfb-run.OvKKyB’
‘~/tmp/scratch/xvfb-run.Ovowm1’ ‘~/tmp/scratch/xvfb-run.R995cn’
‘~/tmp/scratch/xvfb-run.UMEmUP’ ‘~/tmp/scratch/xvfb-run.WKVbsT’
‘~/tmp/scratch/xvfb-run.Z3J4FB’ ‘~/tmp/scratch/xvfb-run.ZVOOjA’
‘~/tmp/scratch/xvfb-run.ZycBB9’ ‘~/tmp/scratch/xvfb-run.aEDoMO’
‘~/tmp/scratch/xvfb-run.bDNtI9’ ‘~/tmp/scratch/xvfb-run.c7D9lX’
‘~/tmp/scratch/xvfb-run.cBBpkY’ ‘~/tmp/scratch/xvfb-run.cYlSGI’
‘~/tmp/scratch/xvfb-run.cpXED6’ ‘~/tmp/scratch/xvfb-run.dgxQGN’
‘~/tmp/scratch/xvfb-run.ds0E0v’ ‘~/tmp/scratch/xvfb-run.fiaFBs’
‘~/tmp/scratch/xvfb-run.fkX4HQ’ ‘~/tmp/scratch/xvfb-run.gTZqzj’
‘~/tmp/scratch/xvfb-run.gZxoc2’ ‘~/tmp/scratch/xvfb-run.lJWwdo’
‘~/tmp/scratch/xvfb-run.lNFtRi’ ‘~/tmp/scratch/xvfb-run.llS6x3’
‘~/tmp/scratch/xvfb-run.mYqdPm’ ‘~/tmp/scratch/xvfb-run.ma98As’
‘~/tmp/scratch/xvfb-run.nWSvUV’ ‘~/tmp/scratch/xvfb-run.oBHc90’
‘~/tmp/scratch/xvfb-run.oKv0cN’ ‘~/tmp/scratch/xvfb-run.qzn8Gn’
‘~/tmp/scratch/xvfb-run.scxRmc’ ‘~/tmp/scratch/xvfb-run.v3XZt7’
‘~/tmp/scratch/xvfb-run.w5lFTR’ ‘~/tmp/scratch/xvfb-run.x4R7UV’
‘~/tmp/scratch/xvfb-run.x6Lz3v’ ‘~/tmp/scratch/xvfb-run.yFIgU2’
‘~/tmp/scratch/xvfb-run.yeH0VB’ ‘~/tmp/scratch/xvfb-run.zdWTM2’
‘/dev/shm/sm_segment.gimli1.1001.ef7a0000.0’
‘~/.cache/pocl/uncached/tempfile_PoF9xr’
‘~/.cache/quarto/sass/sass.kv-shm’ ‘~/.cache/quarto/sass/sass.kv-wal’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.42.2
Check: examples
Result: ERROR
Running examples in ‘doolkit-Ex.R’ failed
The error most likely occurred in:
> ### Name: dkcrop
> ### Title: crop a mesh
> ### Aliases: dkcrop
>
> ### ** Examples
>
> #Crop above a certain threshold:
> mythreshold <- quantile(elev(dkmodel$basin), 0.5)
> mypolynetwork <- poly.network(dkmodel$basin, elev(dkmodel$basin),
+ lwr.limit = mythreshold)
> mynewmesh <- dkcrop(dkmodel$basin, mypolynetwork)
> dkmap(mynewmesh, elev(mynewmesh))
>
> #Crop the sharpest dental elements:
> sharpmesh <- dkcrop(dkmodel$basin, poly.network(dkmodel$basin,
+ Rvcg::vcgCurve(dkmodel$basin)$meanitmax,
+ lwr.limit = quantile(Rvcg::vcgCurve(dkmodel$basin)$meanitmax, 0.8),
+ min.size = 50))
> dkmap(sharpmesh, arc(sharpmesh), col = "arc", col.levels = 20,
+ min.range = -20, max.range = 20)
> #Map of the sharpest elements' elevation, slope and orientation;
> dkmap(sharpmesh, elev(sharpmesh), col = "elev")
Flavor: r-release-macos-x86_64
Version: 1.42.2
Check: examples
Result: ERROR
Running examples in ‘doolkit-Ex.R’ failed
The error most likely occurred in:
> ### Name: dkcrop
> ### Title: crop a mesh
> ### Aliases: dkcrop
>
> ### ** Examples
>
> #Crop above a certain threshold:
> mythreshold <- quantile(elev(dkmodel$basin), 0.5)
> mypolynetwork <- poly.network(dkmodel$basin, elev(dkmodel$basin),
+ lwr.limit = mythreshold)
> mynewmesh <- dkcrop(dkmodel$basin, mypolynetwork)
> dkmap(mynewmesh, elev(mynewmesh))
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64