CRAN Package Check Results for Package haplo.stats

Last updated on 2026-08-03 14:50:52 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	1.9.8.7	8.74	124.02	132.76	ERROR
r-devel-linux-x86_64-debian-gcc	1.9.8.7	5.41	77.39	82.80	ERROR
r-devel-linux-x86_64-fedora-clang	1.9.8.7			127.54	ERROR
r-devel-linux-x86_64-fedora-gcc	1.9.8.7			254.07	ERROR
r-devel-windows-x86_64	1.9.8.7	14.00	111.00	125.00	ERROR
r-patched-linux-x86_64	1.9.8.7	10.50	130.32	140.82	OK
r-release-linux-x86_64	1.9.8.7	8.22	130.39	138.61	OK
r-release-macos-arm64	1.9.8.7	3.00	65.00	68.00	OK
r-release-macos-x86_64	1.9.8.7	8.00	516.00	524.00	OK
r-release-windows-x86_64	1.9.8.7	13.00	121.00	134.00	OK
r-oldrel-macos-arm64	1.9.8.7	2.00	66.00	68.00	OK
r-oldrel-macos-x86_64	1.9.8.7	8.00	407.00	415.00	OK
r-oldrel-windows-x86_64	1.9.8.7	17.00	192.00	209.00	OK

Check Details

Version: 1.9.8.7
Check: tests
Result: ERROR Running ‘testthat.R’ [69s/87s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(haplo.stats) Loading required package: arsenal Loading required package: MASS > > test_check("haplo.stats") Saving _problems/test.haplo.cc-52.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] == Failed tests ================================================================ -- Failure ('test.haplo.cc.R:52:3'): Data.frames from haplo.cc ----------------- Expected `cc.hla.adj$cc.df` to equal `cc.hla.adj.save$cc.df`. Differences: Attributes: < Component "row.names": Numeric: lengths (219, 224) differ > Component "DQB": Lengths (219, 224) differ (string compare on first 219) Component "DQB": 52 string mismatches Component "DRB": Lengths (219, 224) differ (string compare on first 219) Component "DRB": 130 string mismatches Component "B": Lengths (219, 224) differ (string compare on first 219) Component "B": 187 string mismatches Component "Hap-Score": Numeric: lengths (219, 224) differ Component "p-val": Numeric: lengths (219, 224) differ ... [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.9.8.7
Check: tests
Result: ERROR Running ‘testthat.R’ [36s/42s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(haplo.stats) Loading required package: arsenal Loading required package: MASS > > test_check("haplo.stats") Saving _problems/test.haplo.cc-52.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] == Failed tests ================================================================ -- Failure ('test.haplo.cc.R:52:3'): Data.frames from haplo.cc ----------------- Expected `cc.hla.adj$cc.df` to equal `cc.hla.adj.save$cc.df`. Differences: Attributes: < Component "row.names": Numeric: lengths (219, 224) differ > Component "DQB": Lengths (219, 224) differ (string compare on first 219) Component "DQB": 52 string mismatches Component "DRB": Lengths (219, 224) differ (string compare on first 219) Component "DRB": 130 string mismatches Component "B": Lengths (219, 224) differ (string compare on first 219) Component "B": 187 string mismatches Component "Hap-Score": Numeric: lengths (219, 224) differ Component "p-val": Numeric: lengths (219, 224) differ ... [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.9.8.7
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0BJeWG’ ‘~/tmp/scratch/Rtmp0KfYD5’ ‘~/tmp/scratch/Rtmp0f7gSf’ ‘~/tmp/scratch/Rtmp0ySdGz’ ‘~/tmp/scratch/Rtmp1oq4Xb’ ‘~/tmp/scratch/Rtmp2BiOHl’ ‘~/tmp/scratch/Rtmp2QfRfw’ ‘~/tmp/scratch/Rtmp2b2TPJ’ ‘~/tmp/scratch/Rtmp3L5Trm’ ‘~/tmp/scratch/Rtmp3g8TKN’ ‘~/tmp/scratch/Rtmp4BtUIE’ ‘~/tmp/scratch/Rtmp5AsYhe’ ‘~/tmp/scratch/Rtmp7JWCLW’ ‘~/tmp/scratch/Rtmp7QRTNG’ ‘~/tmp/scratch/Rtmp7jktL7’ ‘~/tmp/scratch/Rtmp7txvZi’ ‘~/tmp/scratch/Rtmp80KZ3q’ ‘~/tmp/scratch/Rtmp8MoD30’ ‘~/tmp/scratch/Rtmp8apZaH’ ‘~/tmp/scratch/Rtmp8bBDOI’ ‘~/tmp/scratch/Rtmp8tDkbC’ ‘~/tmp/scratch/Rtmp9pr17V’ ‘~/tmp/scratch/Rtmp9qHvtu’ ‘~/tmp/scratch/Rtmp9w2QZC’ ‘~/tmp/scratch/RtmpA7fvIu’ ‘~/tmp/scratch/RtmpAhyTLd’ ‘~/tmp/scratch/RtmpAwADEG’ ‘~/tmp/scratch/RtmpBLrUOo’ ‘~/tmp/scratch/RtmpBR2OYO’ ‘~/tmp/scratch/RtmpBqkrS1’ ‘~/tmp/scratch/RtmpD4mvtk’ ‘~/tmp/scratch/RtmpDf818F’ ‘~/tmp/scratch/RtmpDnYFxv’ ‘~/tmp/scratch/RtmpFFGyyB’ ‘~/tmp/scratch/RtmpFXGAxg’ ‘~/tmp/scratch/RtmpFZvUMp’ ‘~/tmp/scratch/RtmpG1Gljn’ ‘~/tmp/scratch/RtmpGEwfSX’ ‘~/tmp/scratch/RtmpGT3DRK’ ‘~/tmp/scratch/RtmpGTN9mS’ ‘~/tmp/scratch/RtmpH6voPU’ ‘~/tmp/scratch/RtmpHeBNto’ ‘~/tmp/scratch/RtmpICQYvk’ ‘~/tmp/scratch/RtmpIngxg1’ ‘~/tmp/scratch/RtmpItDhcQ’ ‘~/tmp/scratch/RtmpIyUcsb’ ‘~/tmp/scratch/RtmpJWJxkX’ ‘~/tmp/scratch/RtmpJywnca’ ‘~/tmp/scratch/RtmpK4H20K’ ‘~/tmp/scratch/RtmpKl0mHk’ ‘~/tmp/scratch/RtmpM4sdoB’ ‘~/tmp/scratch/RtmpMQJkDx’ ‘~/tmp/scratch/RtmpMTdrOu’ ‘~/tmp/scratch/RtmpOnT928’ ‘~/tmp/scratch/RtmpPBb4gj’ ‘~/tmp/scratch/RtmpPnc1Z7’ ‘~/tmp/scratch/RtmpQtOnng’ ‘~/tmp/scratch/RtmpRQtdhZ’ ‘~/tmp/scratch/RtmpS8sjyG’ ‘~/tmp/scratch/RtmpSKVSB6’ ‘~/tmp/scratch/RtmpTkAa7P’ ‘~/tmp/scratch/RtmpTm73vM’ ‘~/tmp/scratch/RtmpTz8oZn’ ‘~/tmp/scratch/RtmpU6DykQ’ ‘~/tmp/scratch/RtmpUNQpGs’ ‘~/tmp/scratch/RtmpUUCIJd’ ‘~/tmp/scratch/RtmpUV7LTp’ ‘~/tmp/scratch/RtmpUa4QVs’ ‘~/tmp/scratch/RtmpUdgiZa’ ‘~/tmp/scratch/RtmpVK4YRo’ ‘~/tmp/scratch/RtmpViPDgJ’ ‘~/tmp/scratch/RtmpVpPDw0’ ‘~/tmp/scratch/RtmpWIosvG’ ‘~/tmp/scratch/RtmpWZs9WJ’ ‘~/tmp/scratch/RtmpWeeMQd’ ‘~/tmp/scratch/RtmpWy4Awn’ ‘~/tmp/scratch/RtmpXT5C6e’ ‘~/tmp/scratch/RtmpXcEGXj’ ‘~/tmp/scratch/RtmpXf6rZz’ ‘~/tmp/scratch/RtmpXxWoa9’ ‘~/tmp/scratch/RtmpYeU2ja’ ‘~/tmp/scratch/RtmpYlQfcP’ ‘~/tmp/scratch/RtmpZ9wwIt’ ‘~/tmp/scratch/RtmpaJVOta’ ‘~/tmp/scratch/RtmpbNGbFF’ ‘~/tmp/scratch/RtmpbajQa2’ ‘~/tmp/scratch/Rtmpbobk5B’ ‘~/tmp/scratch/RtmpbzwpMf’ ‘~/tmp/scratch/Rtmpc7QXmr’ ‘~/tmp/scratch/RtmpcX8f0U’ ‘~/tmp/scratch/Rtmpcc73gw’ ‘~/tmp/scratch/RtmpcrMlwX’ ‘~/tmp/scratch/RtmpdHUUsu’ ‘~/tmp/scratch/RtmpdS4vU0’ ‘~/tmp/scratch/Rtmpdtzqj2’ ‘~/tmp/scratch/RtmpfBv50r’ ‘~/tmp/scratch/RtmpfDGCUg’ ‘~/tmp/scratch/RtmpfbkXIz’ ‘~/tmp/scratch/RtmpgEz7K6’ ‘~/tmp/scratch/RtmpgLuF1z’ ‘~/tmp/scratch/RtmpgfnzM1’ ‘~/tmp/scratch/Rtmpi6HmMU’ ‘~/tmp/scratch/RtmpiOSVUR’ ‘~/tmp/scratch/RtmpiPhYOf’ ‘~/tmp/scratch/Rtmpin7lQc’ ‘~/tmp/scratch/RtmpiukLlr’ ‘~/tmp/scratch/RtmpjZ6u0c’ ‘~/tmp/scratch/RtmpkVg4Bd’ ‘~/tmp/scratch/RtmpkmbfPd’ ‘~/tmp/scratch/RtmpmJj65J’ ‘~/tmp/scratch/RtmpmKn8mT’ ‘~/tmp/scratch/RtmpoArKN6’ ‘~/tmp/scratch/RtmpoZ1PWs’ ‘~/tmp/scratch/RtmpoolwN8’ ‘~/tmp/scratch/RtmpoxZAGm’ ‘~/tmp/scratch/Rtmpp7xyOp’ ‘~/tmp/scratch/RtmppiS8op’ ‘~/tmp/scratch/RtmpptpGMX’ ‘~/tmp/scratch/Rtmpq07rgW’ ‘~/tmp/scratch/Rtmpq9B4i5’ ‘~/tmp/scratch/Rtmpqv7RQT’ ‘~/tmp/scratch/RtmpqzKXNa’ ‘~/tmp/scratch/RtmprVDvpR’ ‘~/tmp/scratch/RtmpsalA8R’ ‘~/tmp/scratch/RtmpskEZfg’ ‘~/tmp/scratch/Rtmpt9stG9’ ‘~/tmp/scratch/RtmptGZ1GX’ ‘~/tmp/scratch/Rtmpu1uTd8’ ‘~/tmp/scratch/RtmpvBwnQa’ ‘~/tmp/scratch/RtmpvWKOOD’ ‘~/tmp/scratch/RtmpvryaN3’ ‘~/tmp/scratch/RtmpvvgW4k’ ‘~/tmp/scratch/RtmpvzAro5’ ‘~/tmp/scratch/Rtmpw4Qn3R’ ‘~/tmp/scratch/RtmpwRrhQJ’ ‘~/tmp/scratch/RtmpwXyful’ ‘~/tmp/scratch/RtmpwlK6lY’ ‘~/tmp/scratch/RtmpxNsQio’ ‘~/tmp/scratch/RtmpxPe3cY’ ‘~/tmp/scratch/RtmpykxNJo’ ‘~/tmp/scratch/Rtmpyn2Fiu’ ‘~/tmp/scratch/RtmpzHKFEr’ ‘~/tmp/scratch/RtmpzbvlXB’ ‘~/tmp/scratch/RtmpzgJspW’ ‘~/tmp/scratch/xvfb-run.1ddu3k’ ‘~/tmp/scratch/xvfb-run.2721Hw’ ‘~/tmp/scratch/xvfb-run.2kGg9e’ ‘~/tmp/scratch/xvfb-run.30BJjs’ ‘~/tmp/scratch/xvfb-run.35N2iJ’ ‘~/tmp/scratch/xvfb-run.5vihPw’ ‘~/tmp/scratch/xvfb-run.6JCkGm’ ‘~/tmp/scratch/xvfb-run.6kAN68’ ‘~/tmp/scratch/xvfb-run.7Yi3Bg’ ‘~/tmp/scratch/xvfb-run.7qlisF’ ‘~/tmp/scratch/xvfb-run.8IvaMJ’ ‘~/tmp/scratch/xvfb-run.9HkguK’ ‘~/tmp/scratch/xvfb-run.9pwKZm’ ‘~/tmp/scratch/xvfb-run.BhgkqK’ ‘~/tmp/scratch/xvfb-run.CwS6gK’ ‘~/tmp/scratch/xvfb-run.DBTIze’ ‘~/tmp/scratch/xvfb-run.DFMto1’ ‘~/tmp/scratch/xvfb-run.Etf0bV’ ‘~/tmp/scratch/xvfb-run.F5rQL2’ ‘~/tmp/scratch/xvfb-run.FD2v45’ ‘~/tmp/scratch/xvfb-run.Fu6owQ’ ‘~/tmp/scratch/xvfb-run.GlZ1pu’ ‘~/tmp/scratch/xvfb-run.HIu14f’ ‘~/tmp/scratch/xvfb-run.JPHelX’ ‘~/tmp/scratch/xvfb-run.LNVn8R’ ‘~/tmp/scratch/xvfb-run.LhJvZD’ ‘~/tmp/scratch/xvfb-run.MFA6g3’ ‘~/tmp/scratch/xvfb-run.MXJULr’ ‘~/tmp/scratch/xvfb-run.NYCDye’ ‘~/tmp/scratch/xvfb-run.OtQZJO’ ‘~/tmp/scratch/xvfb-run.PKq3Tk’ ‘~/tmp/scratch/xvfb-run.PPkFZ2’ ‘~/tmp/scratch/xvfb-run.S2gsYb’ ‘~/tmp/scratch/xvfb-run.Uqzpoa’ ‘~/tmp/scratch/xvfb-run.VXnhkn’ ‘~/tmp/scratch/xvfb-run.X2da94’ ‘~/tmp/scratch/xvfb-run.ZBto7N’ ‘~/tmp/scratch/xvfb-run.a9LF1b’ ‘~/tmp/scratch/xvfb-run.bEL5Ch’ ‘~/tmp/scratch/xvfb-run.cOl4Iy’ ‘~/tmp/scratch/xvfb-run.cxdb0Z’ ‘~/tmp/scratch/xvfb-run.fTVIOL’ ‘~/tmp/scratch/xvfb-run.gthSld’ ‘~/tmp/scratch/xvfb-run.iIQ871’ ‘~/tmp/scratch/xvfb-run.jFfhIQ’ ‘~/tmp/scratch/xvfb-run.lV3Ba5’ ‘~/tmp/scratch/xvfb-run.lktNwD’ ‘~/tmp/scratch/xvfb-run.olNZVB’ ‘~/tmp/scratch/xvfb-run.omVkPI’ ‘~/tmp/scratch/xvfb-run.oqxa6o’ ‘~/tmp/scratch/xvfb-run.pwBvO2’ ‘~/tmp/scratch/xvfb-run.qF5c3t’ ‘~/tmp/scratch/xvfb-run.qOBuKk’ ‘~/tmp/scratch/xvfb-run.sBqFgc’ ‘~/tmp/scratch/xvfb-run.sMO3bT’ ‘~/tmp/scratch/xvfb-run.tcEsGf’ ‘~/tmp/scratch/xvfb-run.w6G9Hq’ ‘~/tmp/scratch/xvfb-run.xFQd5v’ ‘~/tmp/scratch/xvfb-run.zpNQgi’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.9.8.7
Check: tests
Result: ERROR Running ‘testthat.R’ [74s/74s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(haplo.stats) Loading required package: arsenal Loading required package: MASS > > test_check("haplo.stats") Saving _problems/test.haplo.cc-52.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] == Failed tests ================================================================ -- Failure ('test.haplo.cc.R:52:3'): Data.frames from haplo.cc ----------------- Expected `cc.hla.adj$cc.df` to equal `cc.hla.adj.save$cc.df`. Differences: Attributes: < Component "row.names": Numeric: lengths (219, 224) differ > Component "DQB": Lengths (219, 224) differ (string compare on first 219) Component "DQB": 52 string mismatches Component "DRB": Lengths (219, 224) differ (string compare on first 219) Component "DRB": 130 string mismatches Component "B": Lengths (219, 224) differ (string compare on first 219) Component "B": 187 string mismatches Component "Hap-Score": Numeric: lengths (219, 224) differ Component "p-val": Numeric: lengths (219, 224) differ ... [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.9.8.7
Check: tests
Result: ERROR Running ‘testthat.R’ [49s/49s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(haplo.stats) Loading required package: arsenal Loading required package: MASS > > test_check("haplo.stats") Saving _problems/test.haplo.cc-52.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] == Failed tests ================================================================ -- Failure ('test.haplo.cc.R:52:3'): Data.frames from haplo.cc ----------------- Expected `cc.hla.adj$cc.df` to equal `cc.hla.adj.save$cc.df`. Differences: Attributes: < Component "row.names": Numeric: lengths (219, 224) differ > Component "DQB": Lengths (219, 224) differ (string compare on first 219) Component "DQB": 52 string mismatches Component "DRB": Lengths (219, 224) differ (string compare on first 219) Component "DRB": 130 string mismatches Component "B": Lengths (219, 224) differ (string compare on first 219) Component "B": 187 string mismatches Component "Hap-Score": Numeric: lengths (219, 224) differ Component "p-val": Numeric: lengths (219, 224) differ ... [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.9.8.7
Check: tests
Result: ERROR Running 'testthat.R' [37s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(haplo.stats) Loading required package: arsenal Loading required package: MASS > > test_check("haplo.stats") Saving _problems/test.haplo.cc-52.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] == Failed tests ================================================================ -- Failure ('test.haplo.cc.R:52:3'): Data.frames from haplo.cc ----------------- Expected `cc.hla.adj$cc.df` to equal `cc.hla.adj.save$cc.df`. Differences: Attributes: < Component "row.names": Numeric: lengths (219, 224) differ > Component "DQB": Lengths (219, 224) differ (string compare on first 219) Component "DQB": 52 string mismatches Component "DRB": Lengths (219, 224) differ (string compare on first 219) Component "DRB": 130 string mismatches Component "B": Lengths (219, 224) differ (string compare on first 219) Component "B": 187 string mismatches Component "Hap-Score": Numeric: lengths (219, 224) differ Component "p-val": Numeric: lengths (219, 224) differ ... [ FAIL 1 | WARN 0 | SKIP 0 | PASS 7 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64