Last updated on 2025-12-15 14:50:20 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.26 | 255.73 | 265.99 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 215.00 | 226.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 196.00 | 206.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 238.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/153s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.674, system: 0.068, elapsed: 2.586 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.856, system: 0.237, elapsed: 16.005 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.018, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.160, system: 0.267, elapsed: 6.438 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.006, elapsed: 0.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.667, system: 0.630, elapsed: 26.529 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.780, system: 0.075, elapsed: 2.388 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.818, system: 0.220, elapsed: 18.728 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.014, elapsed: 0.544 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.176, system: 0.210, elapsed: 11.376 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.005, elapsed: 0.511 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.736, system: 0.552, elapsed: 34.643 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.646, system: 0.048, elapsed: 4.518 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.822, system: 0.174, elapsed: 20.395 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.015, elapsed: 0.350 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.148, system: 0.239, elapsed: 6.560 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.017, elapsed: 0.306 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.285, system: 0.272, elapsed: 1.641 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.961, system: 0.812, elapsed: 35.204 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.776, system: 0.089, elapsed: 3.089 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.905, system: 0.188, elapsed: 17.430 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.015, elapsed: 0.330 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.156, system: 0.236, elapsed: 6.744 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.007, elapsed: 0.318 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.107, system: 0.616, elapsed: 18.798 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.022, system: 1.186, elapsed: 47.782 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/140s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.575, system: 0.043, elapsed: 2.317 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.512, system: 0.077, elapsed: 14.746 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.344 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.729, system: 0.182, elapsed: 5.630 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.005, elapsed: 0.219 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.759, system: 0.351, elapsed: 24.144 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.592, system: 0.030, elapsed: 2.079 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.653, system: 0.077, elapsed: 13.896 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.015, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.890, system: 0.186, elapsed: 5.599 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.248 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.068, system: 0.342, elapsed: 22.963 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.596, system: 0.031, elapsed: 2.391 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.569, system: 0.117, elapsed: 14.606 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.013, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.796, system: 0.178, elapsed: 5.746 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.295 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.142, system: 0.279, elapsed: 1.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.160, system: 0.652, elapsed: 25.673 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.635, system: 0.036, elapsed: 4.350 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.522, system: 0.083, elapsed: 23.980 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.013, elapsed: 0.462 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.831, system: 0.215, elapsed: 7.684 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.314 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.809, system: 0.609, elapsed: 19.982 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.838, system: 0.990, elapsed: 58.349 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64