Last updated on 2025-01-15 02:49:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.7 | 55.64 | 250.51 | 306.15 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.7 | 36.84 | 169.49 | 206.33 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.0.7 | 553.89 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0.7 | 518.07 | OK | |||
| r-devel-windows-x86_64 | 2.0.7 | 59.00 | 275.00 | 334.00 | OK | |
| r-patched-linux-x86_64 | 1.0.3 | 34.25 | 38.99 | 73.24 | OK | |
| r-release-linux-x86_64 | 1.0.3 | 36.07 | 38.90 | 74.97 | OK | |
| r-release-macos-arm64 | 2.0.7 | 102.00 | NOTE | |||
| r-release-macos-x86_64 | 2.0.7 | 142.00 | NOTE | |||
| r-release-windows-x86_64 | 1.0.3 | 36.00 | 490.00 | 526.00 | NOTE | |
| r-oldrel-macos-arm64 | 2.0.7 | 88.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 2.0.7 | 208.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.0.3 | 44.00 | 588.00 | 632.00 | NOTE |
Version: 2.0.7
Check: tests
Result: ERROR
Running ‘testthat.r’ [15s/17s]
Running the tests in ‘tests/testthat.r’ failed.
Complete output:
> library(testthat)
> library(rbiom)
>
> test_check("rbiom")
[ FAIL 1 | WARN 0 | SKIP 32 | PASS 179 ]
══ Skipped tests (32) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test-as_rbiom.r:16:3', 'test-bdiv_heatmap.r:5:3',
'test-bdiv_ord_plot.r:6:3', 'test-biom_merge.r:11:3', 'test-biom_ply.r:9:3',
'test-biom_ply.r:48:3', 'test-boxplot.r:10:3', 'test-boxplot_build.r:3:3',
'test-cache.r:3:3', 'test-corrplot.r:11:3', 'test-distmat_ord_table.r:6:3',
'test-import_table.r:13:3', 'test-plot_heatmap.r:15:3',
'test-plot_palettes.r:6:3', 'test-provenance.r:3:3', 'test-rarefy.r:3:3',
'test-rbiom-deprecated.r:3:3', 'test-rbiom_objects.r:24:3',
'test-read_biom.r:3:3', 'test-read_fasta.r:3:3', 'test-read_tree.r:7:3',
'test-s3_methods.r:3:3', 'test-stats_emmeans.r:8:3',
'test-stats_wilcox.r:3:3', 'test-taxa_heatmap.r:5:3', 'test-taxa_map.r:3:3',
'test-taxa_stacked.r:5:3', 'test-taxa_table.r:3:3', 'test-utils.r:3:3',
'test-validate.r:3:3', 'test-write_biom.r:15:3', 'test-write_xlsx.r:3:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-bdiv_table.r:7:3'): bdiv_table ───────────────────────────────
bdiv_table(hmp5, "unifrac", weighted = TRUE)$.distance (`actual`) not equal to c(0.37, 0.42, 0.14, 0.2, 0.21, 0.32, 0.25, 0.41, 0.3, 0.4) (`expected`).
`actual`: 0.368 0.441 0.126 0.227 0.207 0.317 0.267 0.403 0.318 0.433
`expected`: 0.370 0.420 0.140 0.200 0.210 0.320 0.250 0.410 0.300 0.400
[ FAIL 1 | WARN 0 | SKIP 32 | PASS 179 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.0.7
Check: installed package size
Result: NOTE
installed size is 6.9Mb
sub-directories of 1Mb or more:
libs 5.2Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.0.3
Check: C++ specification
Result: NOTE
Specified C++11: please drop specification unless essential
Flavors: r-release-windows-x86_64, r-oldrel-windows-x86_64