ctreeMI: Conditional Inference Trees with Stacked Multiple Imputation

Implements the stacked-imputation workflow for conditional inference trees ('ctree') described in Sherlock et al. (2026) <doi:10.1080/00273171.2026.2661244>. When data contain missing values, multiply imputed datasets (e.g., from 'mice') are stacked vertically and a single 'ctree' is fit on the combined data. To correct for the artificially inflated sample size introduced by stacking, the pruning significance threshold is divided by the number of imputations M (the Stack/M correction), producing a conservative but interpretable single tree that incorporates imputation uncertainty without requiring pooling of structurally different trees. Also exports stack_imputations() and rescale_alpha() as standalone utilities. The underlying 'ctree' algorithm is provided by 'partykit' (Hothorn & Zeileis, 2015; Hothorn, Hornik & Zeileis, 2006 <doi:10.1198/106186006X133933>).

Version: 0.1.0
Depends: R (≥ 4.0.0)
Imports: partykit (≥ 1.2-0), mice (≥ 3.0.0), methods
Suggests: testthat (≥ 3.0.0)
Published: 2026-07-10
DOI: 10.32614/CRAN.package.ctreeMI (may not be active yet)
Author: Phillip Sherlock ORCID iD [aut, cre]
Maintainer: Phillip Sherlock <phillip.sherlock at ufl.edu>
BugReports: https://github.com/Phillip-Sherlock/ctreeMI/issues
License: GPL (≥ 3)
URL: https://github.com/Phillip-Sherlock/ctreeMI
NeedsCompilation: no
Materials: NEWS
CRAN checks: ctreeMI results

Documentation:

Reference manual: ctreeMI.html , ctreeMI.pdf

Downloads:

Package source: ctreeMI_0.1.0.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): ctreeMI_0.1.0.tgz, r-oldrel (arm64): ctreeMI_0.1.0.tgz, r-release (x86_64): not available, r-oldrel (x86_64): not available

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