ecoregime: Analysis of Ecological Dynamic Regimes

A toolbox for implementing the Ecological Dynamic Regime framework, including functions to characterize and compare groups of ecological trajectories (Sánchez-Pinillos et al., 2023 <doi:10.1002/ecm.1589>); assess the ecological resilience of a disturbed system using a reference dynamic regime (Sánchez-Pinillos et al., 2024 <doi:10.1016/j.biocon.2023.110409>); and forecast ecological trajectories from a dynamic regime (Sánchez-Pinillos et al. 2026, <doi:10.1111/2041-210x.70372>). Additional functions are also available for visualizing ecological dynamic regimes, their representative trajectories, as well as predicted trajectories in a multidimensional state space.

Version: 0.4.1
Depends: R (≥ 4.4.0)
Imports: ape, data.table, ecotraj (≥ 1.1.1), graphics, grDevices, methods, shape, smacof, stats, stringr
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), vegan
Published: 2026-08-04
DOI: 10.32614/CRAN.package.ecoregime
Author: Martina Sánchez-Pinillos ORCID iD [aut, cre, cph]
Maintainer: Martina Sánchez-Pinillos <martina.sanchez.pinillos at gmail.com>
BugReports: https://github.com/MSPinillos/ecoregime/issues
License: GPL (≥ 3)
URL: https://mspinillos.github.io/ecoregime/, https://github.com/MSPinillos/ecoregime
NeedsCompilation: no
Citation: ecoregime citation info
Materials: README, NEWS
CRAN checks: ecoregime results

Documentation:

Reference manual: ecoregime.html , ecoregime.pdf
Vignettes: Ecological Dynamic Regime framework (source, R code)
Predicting ecological trajectories from ecological dynamic regimes (source, R code)
Ecological resilience to pulse disturbances (source, R code)

Downloads:

Package source: ecoregime_0.4.1.tar.gz
Windows binaries: r-devel: ecoregime_0.3.1.zip, r-release: ecoregime_0.3.1.zip, r-oldrel: ecoregime_0.3.1.zip
macOS binaries: r-release (arm64): ecoregime_0.3.1.tgz, r-oldrel (arm64): ecoregime_0.3.1.tgz, r-release (x86_64): ecoregime_0.3.1.tgz, r-oldrel (x86_64): ecoregime_0.3.1.tgz
Old sources: ecoregime archive

Linking:

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