c2e8c1f24d61fba459c53a26822696bc *DESCRIPTION
53e952f8aefdfff8b03f7616b0a73c75 *NAMESPACE
b6e3a7a10cd9e38d98a43487683fb6e7 *R/adjustCounts.R
b841b8f526282f906555948848d595fe *R/autoEstCont.R
b6c5a8a0206eeb1b75c60574ad57dfa9 *R/calculateContaminationFraction.R
4fb8523ef32c9a49dd5324ceaa25dcfb *R/classFunctions.R
c64923a90152724054637f97dad13a4a *R/data.R
a5877d0667ad98c143028baa89d302e5 *R/estimateNonExpressingCells.R
be80e204ab5c8269b10fcd5995540eff *R/estimateSoup.R
9dda5917086a42380e839654d29de4ea *R/load10X.R
ad9abf981ab69bfe955308817ac091b9 *R/package.R
31a47cb08ff83cab0209bf31d369d787 *R/plotFunctions.R
281167b71a5efcb30092983bbc4d80bb *R/quickMarkers.R
c989e7b1f7682631567f9f970c705bcd *R/setProperties.R
763c17d84631ef51d5445007b135da88 *R/utils.R
cc76f25cc50cae7eee28811f5a3949a7 *README.md
b8ac65059a33bebc1269c7dde7f7bf27 *build/vignette.rds
8cd9089366417b202bbc3cd5a44dbfc8 *data/PBMC_metaData.RData
ba258c14ac9f4f459ae69e6b44d286e4 *data/PBMC_sc.RData
b4a174ee6be303ba99eee47d4bdb69b3 *data/datalist
56336bb1469beb1f7a35331c5cf4608d *data/scToy.RData
1c5a442095a4c85b7de1b554767a9e87 *inst/CITATION
df523a373d85f21b93cabd9386c3a3e0 *inst/doc/pbmcTutorial.R
edb426cea3e7dbdd2d2ea3bcafff2c3c *inst/doc/pbmcTutorial.Rmd
099e43c9bd91033b0b937e2974d89de7 *inst/doc/pbmcTutorial.html
db24a5e69c7e6e6e05930fcc8fa89234 *inst/extdata/toyData/filtered_gene_bc_matrices/GRCh38/barcodes.tsv
ac66deaa5a430d93d05c15fa59b3e07f *inst/extdata/toyData/filtered_gene_bc_matrices/GRCh38/genes.tsv
9deffb7b326a744cc3d8cc5f4fa2e720 *inst/extdata/toyData/filtered_gene_bc_matrices/GRCh38/matrix.mtx
6d1338b3eb273d5ef942e29a6f92198b *inst/extdata/toyData/metaData.tsv
c3ec172ed20d916ec017afa32fcf4f84 *inst/extdata/toyData/raw_gene_bc_matrices/GRCh38/barcodes.tsv
ac66deaa5a430d93d05c15fa59b3e07f *inst/extdata/toyData/raw_gene_bc_matrices/GRCh38/genes.tsv
65471e57e4a1c958e4854a3a1be5a069 *inst/extdata/toyData/raw_gene_bc_matrices/GRCh38/matrix.mtx
30a36d11b53d3556b2498b49cd48c91e *man/PBMC_metaData.Rd
50dc192b165d4f9dcfc6609cf2f21983 *man/PBMC_sc.Rd
10bd38ef725d4aa6f7854d54a46e2d54 *man/SoupChannel.Rd
85c448695f6b780302a64f49a23c4857 *man/SoupX.Rd
426f48f7dce90d4427399625b76d8f70 *man/adjustCounts.Rd
af62bdfef18392596f50d9e3cf26ae08 *man/alloc.Rd
6b6b01a33a422c73cf3249f901d9822f *man/autoEstCont.Rd
1171640fc014dc2757e1e13aeacc2daf *man/calculateContaminationFraction.Rd
a4a8c5609757dca28b23257e7aa2a596 *man/estimateNonExpressingCells.Rd
081dc55429662119716d29905ae4de0d *man/estimateSoup.Rd
c17ad396978d0a1d54aefff85d2edde2 *man/expandClusters.Rd
b07bf9f47b420d7aef236142fa240778 *man/initProgBar.Rd
00b50a486da60d34746a6b55971bf743 *man/load10X.Rd
8c347fabf987179a2d0df02473924c76 *man/plotChangeMap.Rd
1bab3002911c546314cc315706acac55 *man/plotMarkerDistribution.Rd
1aeea352b4a38f20a5881b3e41323874 *man/plotMarkerMap.Rd
3c2cf7a0c84356e0a6148a72fd999fe8 *man/plotSoupCorrelation.Rd
95845fdb6dcb986544127b3cec4be11a *man/print.SoupChannel.Rd
080c280ab9455641c10cb60f13ea8174 *man/quickMarkers.Rd
45e5670e20a414d95a4ad0e3ead7da48 *man/scToy.Rd
71fe9a4a5d07471a6caa03d4c9c0e055 *man/setClusters.Rd
104c529ec56df6ea8b5d48ee678ab8e5 *man/setContaminationFraction.Rd
e3684fdd2cab62fc3cb04ff8ef2b4fc6 *man/setDR.Rd
ef1aaf7d914324b7f57248bc3fddb865 *man/setSoupProfile.Rd
edb426cea3e7dbdd2d2ea3bcafff2c3c *vignettes/pbmcTutorial.Rmd
