import(ggplot2)
import(patchwork)

importFrom("stats",
           "aggregate", "ave", "bartlett.test", "cor",
           "dnorm", "fligner.test", "p.adjust", "pairwise.t.test",
           "pairwise.wilcox.test", "pt", "qt", "quantile", "reshape",
           "sd", "setNames", "shapiro.test", "median")
importFrom("utils",
           "combn", "hasName", "read.table", "write.csv")
importFrom("grid",
           "unit")

export("get_gower_dist", "get_sil_widths", "make_clusters", "cluster_to_nexus", "write_partitioned_alignments",
       "get_clockrate_table_BEAST2", "get_clockrate_table_MrBayes", "clockrate_summary", "clockrate_dens_plot", "clockrate_reg_plot",
       "clock_reshape", "get_pwt_rates", "plot_treerates_sgn",
       "combine_log", "FBD_summary", "FBD_dens_plot", "FBD_tests1", "FBD_tests2", "FBD_normality_plot", "FBD_reshape",
       "drop.dummy.beast", "drop.dummy.mb", "offset.to.dummy", "write.beast.treedata", "offset.to.dummy.metadata")

S3method("plot", "sil_width_df")
S3method("plot", "cluster_df")
