fe1402d24cedf50fc8ac6fad069ee972 *DESCRIPTION
1d35757c663ec3e37dddbcb2117faf45 *NAMESPACE
066c044870d3d5300e60ef07fa7fc6e9 *NEWS
d25d649d4817fa401e47b506dcee711a *R/CSEGriskfigure.R
670516124380e85d4183890fc893e70d *R/CSEGtmufigure.R
2d0483e53b0337d5528da061b76ee80c *R/MARSS.R
1ab64d652420fbebff801cf9c3f2eda4 *R/MARSSFisherI.R
ec5d923cf72757afcc699b8f853022e8 *R/MARSS_dfa.R
c3fd581c6bb3894c5c5ccc59c55b2aa9 *R/MARSS_marss.R
944df585e3d48d89003341e54009d6c8 *R/MARSS_marxss.R
0eb4d936d4a325670e008e503af0f51d *R/MARSSaic.R
06bc986e027b681afade8878379aa3a5 *R/MARSSapplynames.R
6d0a20fa115b68e0d4eccff0b85e50c0 *R/MARSSboot.R
67104553b6a5e21413224a7a23fc6610 *R/MARSSharveyobsFI.R
13e57f974115cda7de1acc913e33b0bb *R/MARSShatyt.r
9b36a8e20076efafa9177079d9302077 *R/MARSShessian.R
63a2634eef2f3b722d9ef52fb450f8cf *R/MARSShessian_numerical.R
781dd78d334e58470716248af50e0281 *R/MARSSinfo.R
879595f992d9325e22057922d3256022 *R/MARSSinits.R
d55e2e874fd324cf44aa12b41224d46e *R/MARSSinnovationsboot.R
e2156a6ac9c60f0b3fc7d25ad673d87b *R/MARSSkem.r
8b430190a146111af0fd291ca9ae86f7 *R/MARSSkemcheck.r
f522f8d2e0e244600491ce5da8d1e3ed *R/MARSSkf.R
aa24df97bdaf3172f6a2de5a418fd4a5 *R/MARSSkfas.R
3b36e4db96b2584a0640a9ffb8e98001 *R/MARSSkfss.R
ff333baf4f4329d0370e0cff913ff2b5 *R/MARSSoptim.r
e0778aa7a95ecbc22141f0e3cadabd1f *R/MARSSparamCIs.R
27353c28e10f85ba72f64ae3aa8f58de *R/MARSSsimulate.R
fb7a3ff19c9bc9a416583a8bf35233d6 *R/MARSSvectorizeparam.R
58e725ded53a6593422a90f81e9e82b2 *R/augment_marssMLE.R
75e6c2db1e4112e45af77e24d8b69c4d *R/autoplot_marssMLE.R
04403bb18218bf99cd5bb22516a999b1 *R/checkMARSSInputs.R
661053ccfaf2603a3477378d2cf1ed37 *R/checkModelList.R
035bcbde3d93d002369a67cea2bb7251 *R/coef_marssMLE.r
41fbe57a902d8c739b7b0bf817871230 *R/describe_marssMODEL.R
676d4f4ef9782953a74a2666a137ec35 *R/fitted_marssMLE.R
0c6f46fd14d44a28e78713a08abcca79 *R/glance_marssMLE.R
63b5ee72f6dd2a457d0a73ae55c59125 *R/is_marssMLE.r
61d92cd90aa57b360ac3d90561c3b486 *R/is_marssMODEL.R
ed96a5e8cd76a052b6fc48c3108e1228 *R/logLik_marssMLE.R
61d32adc1e04db0a7c04e3fb51b6652c *R/model_frame_marssMODEL.R
8da7e7510c96905d2b007dff089a731e *R/onLoad.R
a8a61c0e76316cffb80bf820858c0094 *R/plot.marssMLE.R
f4aa0321a0bfc165c8e9b5dafba93008 *R/print_marssMLE.R
0242c4f9f5451ca9e7bd864614d2d1e9 *R/print_marssMODEL.R
bcd44db057d73e13e3b255048bdc0237 *R/progressBar.R
7e2d0560fa9943556a58e399280a108b *R/residuals_marssMLE.R
14f8aaa33903c8bc4cb7a3f82ca96b7d *R/summary_marssMLE.R
d5d584b51fe8d8748c049293d78ecd64 *R/summary_marssMODEL.R
cf36cf892e1f4fae30a6e6cfcf189b59 *R/tidy_marssMLE.R
5d4345fa04e94c6dc01a5e7f2d543ea1 *R/utility_functions.R
e950212cce120f51a1e7135794a1bcdf *build/vignette.rds
40e919bd17df7ed8530c6bfced827ff0 *data/SalmonSurvCUI.rda
6a368bb265850d260a4ade1f5acc2ef0 *data/graywhales.rda
9687fd26d1c7e37deb713b5d15c39d84 *data/grouse.rda
120adc7ef4f2f094afa36bb345c1fc13 *data/harborSeal.rda
4dbccc6fbad7f2d5e21cee4d4f9962a4 *data/harborSealWA.rda
0110004df78fb4604ef464cced89f5cc *data/isleRoyal.rda
0ccd31eb359d325c51fca61107a40d4d *data/ivesDataByWeek.rda
54d4546697857f1217aafa15f4a93557 *data/ivesDataLP.rda
b221b6199191929a3e9a7308b024dff5 *data/kestrel.rda
64af6856811e7129be051c64a4c305ff *data/lakeWAplankton.rda
3ac0630c867dd992eaa9e1a3629261fe *data/loggerhead.rda
7461688b324fce41b713db0d90dbc451 *data/loggerheadNoisy.rda
7dba40d4261dae2282fce64e7a4885ee *data/okanaganRedds.rda
9e1f016e8a44722b82c4537c7a4c8bb7 *data/prairiechicken.rda
739f2f53458171d2566e20a5336345d1 *data/redstart.rda
59a0eba4833c80a67f0c0eb401578cb5 *data/rockfish.rda
ff1f8311cc96d406be8e6304e775d1ed *data/wilddogs.rda
e964b2eaf3224ee6202148e0439f8354 *inst/CITATION
a98bae9f0ef0b74408bae1fc213ae96b *inst/doc/Chapter_AnimalTracking.R
c617d0755c9c2babe8a3c1e582fbb2fe *inst/doc/Chapter_CombiningTrendData.R
cd64a57505a72af02458ee88df01a4e6 *inst/doc/Chapter_Covariates.R
0c37bfbde1af85010c12ee8ae167faba *inst/doc/Chapter_DFA.R
ad926978761d8faaa4ec820c0f8f7530 *inst/doc/Chapter_MARp.R
f2569022a0ad2d2019bddd09231a77d0 *inst/doc/Chapter_MLR.R
6039b32e9b790375b27856d321fc249d *inst/doc/Chapter_PVA.R
5013ace501ef2faaa58ae4007374b1e4 *inst/doc/Chapter_SealPopStructure.R
468315bc1ae9993cc1cef7e680f67477 *inst/doc/Chapter_SealTrend.R
c581b3bf45095625628ad232a018df98 *inst/doc/Chapter_SpeciesInteractions.R
a70c53ec66355e19ac3b69f7578483ce *inst/doc/Chapter_StructuralBreaks.R
f6ebf345c65677fad115bfe7ab5e56c6 *inst/doc/Chapter_UnivariateDLM.R
96d76d22c4440116df0e088c8d4919eb *inst/doc/Chapter_inits.R
f574c5a9fcc6fc51509334aa800b1475 *inst/doc/EMDerivation.Rnw
d04f21577e2431adffbcf8f7535376d8 *inst/doc/EMDerivation.pdf
c5c6b9f1201a9eab107134e58f769337 *inst/doc/Quick_Start.Rnw
569501efbb3ef8f7d42f3493044afd75 *inst/doc/Quick_Start.pdf
51d4ce1223701ceb5ebae66ff4346dcc *inst/doc/Residuals.Rnw
1fd5087007fcacdb9f50edead2650c88 *inst/doc/Residuals.pdf
44666716bc3de906b780efecc3977503 *inst/doc/UserGuide.Rnw
83355b88fefa5a54eae48c241c91e04c *inst/doc/UserGuide.pdf
c3326b80b1dd949550b9345a58c68f6e *inst/doc/index.html
0d8fc8afaeadbbde5e517314685e16b2 *inst/doc/versiontest.R
adbd945f1caeb53f1cce5ee625ae0aeb *man/CSEGriskfigure.Rd
460e7289157a8ea1d0ecd63174bf3e57 *man/CSEGtmufigure.Rd
c8d5068c5668bd2e211267fa3287f5f6 *man/MARSS-package.Rd
c278a55fa7dfc95238edb1643ff8e590 *man/MARSS.Rd
d4a04d977a7331b95f821c4cda199c56 *man/MARSS_dfa.Rd
4982790b1b24bb666b5c73729a05d45b *man/MARSS_marss.Rd
01bbe16449404768b6077a39871368ea *man/MARSS_marxss.Rd
f75ebb10831c0b634bfddaed22c7583a *man/MARSSaic.Rd
deb410f8100eded0c01fc1e27a02eafc *man/MARSSapplynames.Rd
d5d51c7fd5acc35e406b1803c56bc2ff *man/MARSSboot.Rd
930a007ae789a523b7e62c5f4b824c30 *man/MARSSharveyobsFI.Rd
7acb2a606a1ccc66b2580393a2fd8684 *man/MARSShatyt.Rd
f13ef28ccbd01015225daaad79e1b002 *man/MARSShessian.Rd
c2530e643ec748199d70edfcacc5a3d9 *man/MARSShessian_numerical.Rd
0cda1fbd58659618f9fce975a1c383ff *man/MARSSinfo.Rd
084908f75887d92086d6d297eaf6df98 *man/MARSSinits.Rd
10361f6483c29476a7592dddb96af797 *man/MARSSinnovationsboot.Rd
001d675ae5f51efc32075e0051182cb7 *man/MARSSkem.Rd
1e4476ed55175a433d95be87a120b937 *man/MARSSkemcheck.Rd
192f8f8cb5324b05d64643a106623771 *man/MARSSkf.Rd
ecbd42914bcc53d8d4f70c21ad63d717 *man/MARSSoptim.Rd
6353ebe0979b05759462452c4a466d12 *man/MARSSparamCIs.Rd
f8a1908c762350144670d3f98669f5b1 *man/MARSSsimulate.Rd
40d82de4293651fe6e59f8d3d73fcb97 *man/MARSSvectorizeparam.Rd
34b33c53c3d35fb715e20b05e8a0f317 *man/SalmonSurvCUI.Rd
82cbfbc0e47812179890c63a345e952a *man/allowed.Rd
aa0964d4ada3a3131cf6764b9501af66 *man/as_marssMODEL.Rd
9d73879feb76dfd69bbb68e96cdac1c8 *man/augment_marssMLE.Rd
bf519821de54e5a8a17859fc647537ea *man/checkMARSSInputs.Rd
3dc719c78cbc66b0a75ad5f8554284c3 *man/checkModelList.Rd
d4cae5e1306f700c08fd2bb60d71bba0 *man/coef_marssMLE.Rd
6e4cc796e67fb84be61abb1afd486680 *man/fitted_marssMLE.Rd
610aff8a4e6ea27067304f0f8f51e1a7 *man/glance_marssMLE.Rd
f583ed66e5745a7a84eb3b9710b55ea7 *man/graywhales.Rd
78cf722a853fd3899d0a5c599eecf781 *man/harborSeal.Rd
d026d11a83daa4b8dacad65e8e5bc77e *man/is_marssMLE.Rd
6a7f7d75878174f0a3346c6afbf3f3f8 *man/is_marssMODEL.Rd
1005d4680fd4451d029f36b433ab7332 *man/isleRoyal.Rd
a8517d21eaf41f10a5e2b202ca4380ca *man/loggerhead.Rd
eec12f0022d144b1f6b2dd4ce26d45fe *man/marssMLE-class.Rd
42e8aed2699ef392dd23f56526ca722e *man/marssMODEL-class.Rd
73dddfb38784b66776d06edda9594a34 *man/model_frame_marssMODEL.Rd
8e7e827e5b1b7e5462f7a4a88032ffc9 *man/plankton.Rd
40d9a31cbae2e581769fdf1cd412d446 *man/plot_marssMLE.Rd
eaea16f8f8e90b19be70a71c0cd226ce *man/print_marssMLE.Rd
0c89576f9ffb99069040233d0b3c98d1 *man/print_marssMODEL.Rd
f48bf0ae45557bd2403cbbd6297d57a0 *man/residuals_marssMLE.Rd
b1964f43adccf3cb171c03eb8a743f09 *man/stdInnov.Rd
c408dc3961d4a6e07ee4c3c756b69cc6 *man/tidy_marssMLE.Rd
56d16d288367dd8e5c586acad881ec8a *man/utility_functions.Rd
c9fb1ed60e99e8b15db4c442b0a70540 *man/zscore.Rd
f574c5a9fcc6fc51509334aa800b1475 *vignettes/EMDerivation.Rnw
df57eafa8224840d94451a849c3be245 *vignettes/EMDerivation.bib
c5c6b9f1201a9eab107134e58f769337 *vignettes/Quick_Start.Rnw
51d4ce1223701ceb5ebae66ff4346dcc *vignettes/Residuals.Rnw
44666716bc3de906b780efecc3977503 *vignettes/UserGuide.Rnw
