2c0a6cb438aadef4cbd707e0cb753adf *DESCRIPTION
8ac0b6eb9c2da97faadb1bbec16d1f98 *NAMESPACE
cf9b669a30971546ea726d481914ee28 *NEWS.md
fb94b502d30bda3cb55e03e54b886937 *R/AssayMutRatio.R
bed7a802472469448060c99b5906b4fe *R/LastfiveNrMutation.R
8d0411644e924af8abeaff641736b364 *R/MutByGene.R
02a2f67fef286a967bcee47340b7feb4 *R/data.R
0963461b1a9a58a9235512cb74248ae2 *R/doubleAssay.R
96cdba3e0b79f28a6615480ef705a10a *R/globalProteinMut.R
164881767d481c8850f39b5caade85a9 *R/globalSNPprofile.R
102966e4f8689afc5b8dccb1617d57f5 *R/indelSNP.R
909a43506d913789c892a24ac2e18437 *R/mergeEvents.R
3c067cd580041ebc3b14e25f82a562ec *R/mutStat.R
740298c79852f4c625464a85eab3aecd *R/nucmerRMD.R
23fcc7fb0e5a0ba6f4bb6e374dff7e83 *R/plotMutAnno.R
e894af0dc20423c243ea4a8f911d3be8 *R/plotMutProteins.R
a0c4aa3bc86f7db19a39555613ed1fbf *README.md
105faaf21c060ce3f24f405bc1f05e67 *data/assays.rda
003c7570a8836f7a6e80d3f50e20129e *data/chinalist.rda
375a25d148785c1d7fc3f5b36fdd7f8a *data/covid_annot.rda
da0e086a2c949d62f695fac9ec7b5819 *data/gene_position.rda
5db7eab4c6a86ce3a60ea002cc963e1d *data/gff3.rda
26241c8f585c56438f5643a0d2c06b0a *data/nucmer.rda
00e89f8a190166ef3ff045a6d77b8ddb *data/nucmerr.rda
74129b2281d42b0a6e53a905eeda1c08 *data/refseq.rda
cabc26e26d8f2f6ec9428ea81c8aa4b1 *inst/extdata/nucmer10.R
d9b5dc1092eae6c7c857489e1f5cab8f *inst/extdata/nucmer10.zip
3bdf4b492fbc8f1d1e962c598295cee7 *inst/extdata/vignette.html
bfa9a241e8a43ec02db0dbad39b4da44 *man/AssayMutRatio.Rd
5fa4141147bcd6ff068092f1a2d7bcb9 *man/LastfiveNrMutation.Rd
46fe8ee2442ed4a30c90d6896e6e6bee *man/MutByGene.Rd
732a6d60113e429eac825ff5dfebb301 *man/assays.Rd
fa209552ba9c556adf7ad5a5b4ba448f *man/chinalist.Rd
e041db2218098321138c1e04f866bd78 *man/covid_annot.Rd
99918b4e3861362591a7e40465324e6c *man/doubleAssay.Rd
001777d44744d21814d1d8f4cce7c9e3 *man/figures/README-MutByGene-1.png
7a109cb472eb2a3a9fefddad92836b74 *man/gene_position.Rd
f16d713959d6e9d284b1b55080befe92 *man/gff3.Rd
d06cffa01c9d32b6193c4410d6eb0191 *man/globalProteinMut.Rd
ab5a71edbe6f00a2a74cfa116f64b60c *man/globalSNPprofile.Rd
1b571948c5c9973f36cfa4624d7e19da *man/indelSNP.Rd
3d81574b418768a9d11c7d96d93bbc43 *man/mergeEvents.Rd
3d3b72089163b6c72be79ea8fb644807 *man/mutStat.Rd
fd56f1f562a4a43e4d3b43f086787799 *man/nucmer.Rd
d6057735804e773aad6c50ca0512d28b *man/nucmerRMD.Rd
1e8f5ae43cbb934f49496b1d252df7db *man/nucmerr.Rd
9b0d414d78cab0e19b1026468769a67d *man/plotMutAnno.Rd
fc9944bb77311317b5efcf956af3ca9e *man/plotMutProteins.Rd
a9ec9bbb01267513d8b38a36fb2f8f79 *man/refseq.Rd
4f284d53808078d5ea60bc1fd5b1fee6 *tests/testthat.R
aba84a61ec6611bb35e649d643de9184 *tests/testthat/test-assays.R
