f6f1c19f7381e1d7eaac5ea23c1f68cc *DESCRIPTION
67084f7aa62593bc4e75ab4b787688dd *NAMESPACE
0415bf5d11a7033109f52e9d175f66e7 *NEWS.md
6ca2e6d2076247a68bbc726d54049044 *R/RcppExports.R
ff77efbbad6089117990dbd0dbcc019d *R/generateTumor.R
6e6898f4f95a05b1474b325b8ec12973 *R/progDAG.R
261b9754a8491b0b5ae6ae43fcf682af *R/sequencing.R
49f40d551e6a8f69438d443fae2fe4ea *R/spatial.R
7e4a29cb609b5ccacd2c371b8e002a0d *R/visualize.R
3bef9ca55e7aa8d7f4f87e0989efdf11 *build/vignette.rds
e0a7694ad0855d8f65a686b89e711a5e *inst/doc/SITH.R
c6b2ece2250b6d573935d6230c83c928 *inst/doc/SITH.Rmd
0fc55c20c9122ad8fef9561e5a584a4b *inst/doc/SITH.html
ecf51319316d5804e173d00bbe2b8305 *man/SITH-package.Rd
441ee456072fea985e76f3ac97e03ac2 *man/bulkSample.Rd
6d144be196b555a0fdfa2b68efb768a2 *man/plotSlice.Rd
ddef04ed5e9594827aa9225b8912393d *man/progressionChain.Rd
2bf30bffd4108d8e4f15681ad2750cab *man/progressionDAG_from_igraph.Rd
3f8c6f322f63707f89bbe45391558d7e *man/randomBulkSamples.Rd
1ff3cbeb436d94e808b5cab6e382e5dc *man/randomNeedles.Rd
41510f9314928a3cb9254bc7d08a8cf8 *man/randomSingleCells.Rd
e670e26e2b44ab2b65ec1b54da1a85ee *man/simulateTumor.Rd
a4aea066bb1839ca24fc3952fb528e8e *man/singleCell.Rd
3d6ae9346d3e2e2cc920c60399f490d2 *man/spatialDistribution.Rd
8e3bd486af1950be7b3ecc8d32497ce0 *man/visualizeTumor.Rd
f17a18a4f831fc9465a03eb0f797e2c4 *src/RcppExports.cpp
d9ba75a7f757392bcc6e0805c472f8b5 *src/gillespie.cpp
a14342b17ead76ff00fdcae4229a4416 *src/gillespie.h
5d89545507263454791c3d8173b86d79 *src/main.cpp
9afe5765c0975a772b7259169ce42489 *src/neighbors.h
fdc515fdbdaa57565b61d758832e94a8 *src/postproc.cpp
148a0f745c3511c34509714624639563 *src/postproc.h
f69e2e561743b9e333c7fbc34fdbe577 *src/sampler.h
6e653f9cc9310a5da3bb8da833f19d87 *src/simulations.cpp
9b26ccf1240b0aed4eca7d4613361c7d *src/simulations.h
004754543427ff21bd8aff47e110b31f *src/simutils.cpp
08b6a1136338fbd54b6a2026664a2a74 *src/simutils.h
6d1cb48776a533bf218d93201dbbeb3c *tests/testthat.R
78b3ac286f58f1088beacf18913f97b7 *tests/testthat/test-simulation.R
c6b2ece2250b6d573935d6230c83c928 *vignettes/SITH.Rmd
