Last updated on 2026-11-12 15:01:01 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.2 | 6.92 | 222.81 | 229.73 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.2 | 4.30 | 163.71 | 168.01 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.2 | 158.89 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0.2 | 156.85 | OK | |||
| r-devel-windows-x86_64 | 2.0.2 | 11.00 | 199.00 | 210.00 | OK | |
| r-patched-linux-x86_64 | 2.0.2 | 5.82 | 207.80 | 213.62 | OK | |
| r-release-linux-x86_64 | 2.0.2 | 6.71 | 211.28 | 217.99 | OK | |
| r-release-macos-arm64 | 2.0.2 | 2.00 | 43.00 | 45.00 | OK | |
| r-release-macos-x86_64 | 2.0.2 | 5.00 | 264.00 | 269.00 | OK | |
| r-release-windows-x86_64 | 2.0.2 | 9.00 | 187.00 | 196.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.2 | 2.00 | 59.00 | 61.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.0.2 | 5.00 | 275.00 | 280.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.2 | 12.00 | 229.00 | 241.00 | OK |
Version: 2.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [52s/29s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(FCO)
>
> test_check("FCO")
This is lavaan 0.7-3
lavaan is FREE software! Please report any bugs.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24:
Traceback:
lapply(seq_len(cores), inner.do)
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
25: 2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, parallel::mclapply(1:rep, function(r) { slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], free1 = free, s = s, k = k, nf = nf) sampling_weights_type = swt_type)}, mc.cores = cores)
3: 26: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) wls_v = wls_v, nacov = nacov)
4: 27: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, eval(code, test_env)
lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, 28: sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)eval(code, test_env)
29: withCallingHandlers({ 5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") if (snapshot_skipped) {
skip("On CRAN") 6: } else if (!new_expectations && skip_on_empty) {eval(sc, parent.frame())
skip_empty() } 7: }, expectation = handle_expectation, packageNotFoundError = function(e) {eval(sc, parent.frame()) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed.")) 8: }lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 9: error = handle_error, interrupt = handle_interrupt)doTryCatch(return(expr), name, parentenv, handler)
10: 30: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(expr, names, parentenv, handlers[[1L]])
31: 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchList(expr, classes, parentenv, handlers)
32:
12: tryCatchList(expr, classes, parentenv, handlers)
tryCatch(expr, error = function(e) { call <- conditionCall(e)33: tryCatch(withCallingHandlers({ if (!is.null(call)) { eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { if (identical(call[[1L]], quote(doTryCatch))) skip("On CRAN") } call <- sys.call(-4L) else if (!new_expectations && skip_on_empty) { dcall <- deparse(call, nlines = 1L) skip_empty() prefix <- paste("Error in", dcall, ": ") LONG <- 75L }}, expectation = handle_expectation, packageNotFoundError = function(e) { sm <- strsplit(conditionMessage(e), "\n")[[1L]] if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") }}, snapshot_on_cran = function(cnd) { if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") type = "b")}, skip = handle_skip, warning = handle_warning, message = handle_message, if (w > LONG) prefix <- paste0(prefix, "\n ") error = handle_error, interrupt = handle_interrupt), error = handle_fatal) }
else prefix <- "Error : "34: msg <- paste0(prefix, conditionMessage(e), "\n")doWithOneRestart(return(expr), restart) .Internal(seterrmessage(msg[1L]))
35: if (!silent && isTRUE(getOption("show.error.messages"))) {withOneRestart(expr, restarts[[1L]])
cat(msg, file = outFile) .Internal(printDeferredWarnings())36: }withRestarts(tryCatch(withCallingHandlers({ invisible(structure(msg, class = "try-error", condition = e))}) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {13: skip("On CRAN")try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, } std.lv = TRUE, warn = FALSE), silent = TRUE) else if (!new_expectations && skip_on_empty) { skip_empty()
}14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, }, expectation = handle_expectation, packageNotFoundError = function(e) { free1 = free, s = s, k = k, nf = nf) if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))
15: }FUN(X[[i]], ...)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE16: invokeRestart("muffle_cran_snapshot")lapply(X = S, FUN = FUN, ...)}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
end_test = function() { })17:
37: doTryCatch(return(expr), name, parentenv, handler)test_code(code, parent.frame())
18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])38: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?",
{19: out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1)tryCatchList(expr, classes, parentenv, handlers)
expect_gt(FCO:::mardia(out$x)[1], 1)20: })tryCatch(expr, error = function(e) {
call <- conditionCall(e)39: eval(code, test_env)
40: if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) eval(code, test_env)
call <- sys.call(-4L)41: dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ")withCallingHandlers({ eval(code, test_env) LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") skip("On CRAN") } if (is.na(w)) else if (!new_expectations && skip_on_empty) { w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], skip_empty() type = "b") } if (w > LONG) }, expectation = handle_expectation, packageNotFoundError = function(e) { prefix <- paste0(prefix, "\n ") if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } }}, snapshot_on_cran = function(cnd) { else prefix <- "Error : " snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))}, skip = handle_skip, warning = handle_warning, message = handle_message, if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) error = handle_error, interrupt = handle_interrupt) .Internal(printDeferredWarnings())
} invisible(structure(msg, class = "try-error", condition = e))42: doTryCatch(return(expr), name, parentenv, handler)
})
43: 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
44: tryCatchList(expr, classes, parentenv, handlers)22:
sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
45: tryCatch(withCallingHandlers({23: eval(code, test_env)FUN(X[[i]], ...) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) { skip("On CRAN")24: }lapply(seq_len(cores), inner.do) else if (!new_expectations && skip_on_empty) {
skip_empty()25: }parallel::mclapply(1:rep, function(r) {}, expectation = handle_expectation, packageNotFoundError = function(e) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf) if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))}, mc.cores = cores) }}, snapshot_on_cran = function(cnd) {
26: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)27: eval(code, test_env)
28: 46: eval(code, test_env)
doWithOneRestart(return(expr), restart)29:
withCallingHandlers({47: eval(code, test_env)withOneRestart(expr, restarts[[1L]]) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {48: withRestarts(tryCatch(withCallingHandlers({ skip("On CRAN") eval(code, test_env) } else if (!new_expectations && skip_on_empty) { new_expectations <- the$test_expectations > starting_expectations skip_empty() if (snapshot_skipped) { } skip("On CRAN")}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) { else if (!new_expectations && skip_on_empty) { skip(paste0("{", e$package, "} is not installed.")) skip_empty() } }}, snapshot_on_cran = function(cnd) {}, expectation = handle_expectation, packageNotFoundError = function(e) { snapshot_skipped <<- TRUE if (on_cran()) { invokeRestart("muffle_cran_snapshot") skip(paste0("{", e$package, "} is not installed."))}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE30: invokeRestart("muffle_cran_snapshot")doTryCatch(return(expr), name, parentenv, handler)
}, skip = handle_skip, warning = handle_warning, message = handle_message, 31: tryCatchOne(expr, names, parentenv, handlers[[1L]]) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
32: end_test = function() {tryCatchList(expr, classes, parentenv, handlers) })
33: 49: tryCatch(withCallingHandlers({test_code(code = exprs, env = env, reporter = get_reporter() %||% eval(code, test_env) StopReporter$new()) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {50: skip("On CRAN")source_file(path, env = env(env), desc = desc, shuffle = shuffle, } error_call = error_call) else if (!new_expectations && skip_on_empty) {
skip_empty()51: }FUN(X[[i]], ...)}, expectation = handle_expectation, packageNotFoundError = function(e) {
52: if (on_cran()) {lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, skip(paste0("{", e$package, "} is not installed.")) error_call = error_call) }
53: }, snapshot_on_cran = function(cnd) {doTryCatch(return(expr), name, parentenv, handler) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")54: }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: 34: tryCatchList(expr, classes, parentenv, handlers)doWithOneRestart(return(expr), restart)
56: 35: tryCatch(code, testthat_abort_reporter = function(cnd) {withOneRestart(expr, restarts[[1L]]) cat(conditionMessage(cnd), "\n")
NULL36: })withRestarts(tryCatch(withCallingHandlers({
eval(code, test_env)57: new_expectations <- the$test_expectations > starting_expectationswith_reporter(reporters$multi, lapply(test_paths, test_one_file, if (snapshot_skipped) { env = env, desc = desc, shuffle = shuffle, error_call = error_call)) skip("On CRAN")
}58: else if (!new_expectations && skip_on_empty) {test_files_serial(test_dir = test_dir, test_package = test_package, skip_empty() test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, } env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, }, expectation = handle_expectation, packageNotFoundError = function(e) { desc = desc, load_package = load_package, shuffle = shuffle, if (on_cran()) { error_call = error_call) skip(paste0("{", e$package, "} is not installed."))
}59: }, snapshot_on_cran = function(cnd) {test_files(test_dir = path, test_paths = test_paths, test_package = package, snapshot_skipped <<- TRUE reporter = reporter, load_helpers = load_helpers, env = env, invokeRestart("muffle_cran_snapshot") stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, }, skip = handle_skip, warning = handle_warning, message = handle_message, load_package = load_package, parallel = parallel, shuffle = shuffle) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
end_test = function() { })60:
test_dir("testthat", package = package, reporter = reporter, 37: ..., load_package = "installed")test_code(code, parent.frame())
61: 38: test_check("FCO")test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?",
{An irrecoverable exception occurred. R is aborting now ...
out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
*** caught segfault ***
address 0x110, cause 'invalid permissions'
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) {
Traceback:
cat(conditionMessage(cnd), "\n") 1: NULLlav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)})
2: 57: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, with_reporter(reporters$multi, lapply(test_paths, test_one_file, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, env = env, desc = desc, shuffle = shuffle, error_call = error_call)) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]],
sampling_weights_type = swt_type)58:
test_files_serial(test_dir = test_dir, test_package = test_package, 3: test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, desc = desc, load_package = load_package, shuffle = shuffle, wls_v = wls_v, nacov = nacov) error_call = error_call)
4: 59: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, test_files(test_dir = path, test_paths = test_paths, test_package = package, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, reporter = reporter, load_helpers = load_helpers, env = env, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) load_package = load_package, parallel = parallel, shuffle = shuffle)
5: 60: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, test_dir("testthat", package = package, reporter = reporter, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") ..., load_package = "installed")
6: 61: eval(sc, parent.frame())test_check("FCO")
7: An irrecoverable exception occurred. R is aborting now ...
eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {
Traceback:
cat(msg, file = outFile) 1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) .Internal(printDeferredWarnings())
} 2: invisible(structure(msg, class = "try-error", condition = e))lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, })
fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, 21: unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], try(lapply(X = S, FUN = FUN, ...), silent = TRUE) sampling_weights_type = swt_type)
22: 3: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions,
wls_v = wls_v, nacov = nacov)23:
FUN(X[[i]], ...)
4: 24: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lapply(seq_len(cores), inner.do)
lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, 25: sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, parallel::mclapply(1:rep, function(r) { ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
}, mc.cores = cores) 5:
lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, 26: std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
6:
eval(sc, parent.frame())27:
eval(code, test_env) 7:
28: eval(sc, parent.frame())eval(code, test_env)
8: 29: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, withCallingHandlers({ std.lv = TRUE, warn = FALSE) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations 9: if (snapshot_skipped) {doTryCatch(return(expr), name, parentenv, handler)
skip("On CRAN") }10: else if (!new_expectations && skip_on_empty) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip_empty()
}}, expectation = handle_expectation, packageNotFoundError = function(e) {11: if (on_cran()) {tryCatchList(expr, classes, parentenv, handlers) skip(paste0("{", e$package, "} is not installed.")) }
}, snapshot_on_cran = function(cnd) {12: snapshot_skipped <<- TRUEtryCatch(expr, error = function(e) { invokeRestart("muffle_cran_snapshot") call <- conditionCall(e) if (!is.null(call)) {}, skip = handle_skip, warning = handle_warning, message = handle_message, if (identical(call[[1L]], quote(doTryCatch))) error = handle_error, interrupt = handle_interrupt) call <- sys.call(-4L)
dcall <- deparse(call, nlines = 1L)30: prefix <- paste("Error in", dcall, ": ") LONG <- 75LdoTryCatch(return(expr), name, parentenv, handler) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")31: if (is.na(w)) tryCatchOne(expr, names, parentenv, handlers[[1L]]) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG)
prefix <- paste0(prefix, "\n ")32: }tryCatchList(expr, classes, parentenv, handlers) else prefix <- "Error : "
33: msg <- paste0(prefix, conditionMessage(e), "\n")tryCatch(withCallingHandlers({ .Internal(seterrmessage(msg[1L])) eval(code, test_env) if (!silent && isTRUE(getOption("show.error.messages"))) { new_expectations <- the$test_expectations > starting_expectations cat(msg, file = outFile) if (snapshot_skipped) { .Internal(printDeferredWarnings()) skip("On CRAN") } } invisible(structure(msg, class = "try-error", condition = e)) else if (!new_expectations && skip_on_empty) {}) skip_empty()
}}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, } std.lv = TRUE, warn = FALSE), silent = TRUE)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE14: invokeRestart("muffle_cran_snapshot")generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, }, skip = handle_skip, warning = handle_warning, message = handle_message, free1 = free, s = s, k = k, nf = nf)
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)15:
FUN(X[[i]], ...)34: doWithOneRestart(return(expr), restart)
16: 35: withOneRestart(expr, restarts[[1L]])lapply(X = S, FUN = FUN, ...)
36: 17: withRestarts(tryCatch(withCallingHandlers({doTryCatch(return(expr), name, parentenv, handler) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations18: if (snapshot_skipped) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip("On CRAN")
}19: else if (!new_expectations && skip_on_empty) {tryCatchList(expr, classes, parentenv, handlers)
skip_empty()20: }tryCatch(expr, error = function(e) {}, expectation = handle_expectation, packageNotFoundError = function(e) { call <- conditionCall(e) if (on_cran()) { if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) skip(paste0("{", e$package, "} is not installed.")) call <- sys.call(-4L) } dcall <- deparse(call, nlines = 1L)}, snapshot_on_cran = function(cnd) { prefix <- paste("Error in", dcall, ": ") snapshot_skipped <<- TRUE LONG <- 75L invokeRestart("muffle_cran_snapshot") sm <- strsplit(conditionMessage(e), "\n")[[1L]]}, skip = handle_skip, warning = handle_warning, message = handle_message, w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") error = handle_error, interrupt = handle_interrupt), error = handle_fatal), if (is.na(w)) end_test = function() { w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], }) type = "b")
if (w > LONG) prefix <- paste0(prefix, "\n ")37: } else prefix <- "Error : "test_code(code, parent.frame()) msg <- paste0(prefix, conditionMessage(e), "\n")
.Internal(seterrmessage(msg[1L]))38: if (!silent && isTRUE(getOption("show.error.messages"))) {test_that("Is the seed set properly?", { cat(msg, file = outFile) out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) .Internal(printDeferredWarnings()) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) } expect_equal(out1$seed, out2$seed) invisible(structure(msg, class = "try-error", condition = e))})})
39: eval(code, test_env)
40: 21: eval(code, test_env)try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
41: 22: withCallingHandlers({sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations23: FUN(X[[i]], ...) if (snapshot_skipped) { skip("On CRAN")
24: }lapply(seq_len(cores), inner.do) else if (!new_expectations && skip_on_empty) {
skip_empty() }25: }, expectation = handle_expectation, packageNotFoundError = function(e) {parallel::mclapply(1:rep, function(r) { if (on_cran()) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf) skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {}, mc.cores = cores) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")26: }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
27: 42: eval(code, test_env)doTryCatch(return(expr), name, parentenv, handler)
28: 43: eval(code, test_env)tryCatchOne(expr, names, parentenv, handlers[[1L]])
29: 44: withCallingHandlers({tryCatchList(expr, classes, parentenv, handlers)
eval(code, test_env)45: new_expectations <- the$test_expectations > starting_expectationstryCatch(withCallingHandlers({ if (snapshot_skipped) { eval(code, test_env) skip("On CRAN") new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { } skip("On CRAN") } else if (!new_expectations && skip_on_empty) { else if (!new_expectations && skip_on_empty) { skip_empty() skip_empty() } }}, expectation = handle_expectation, packageNotFoundError = function(e) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) skip(paste0("{", e$package, "} is not installed.")) } }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE}, snapshot_on_cran = function(cnd) { invokeRestart("muffle_cran_snapshot") snapshot_skipped <<- TRUE}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt) invokeRestart("muffle_cran_snapshot")
30: doTryCatch(return(expr), name, parentenv, handler)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)31:
tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: 46: tryCatchList(expr, classes, parentenv, handlers)doWithOneRestart(return(expr), restart)
33:
tryCatch(withCallingHandlers({47: eval(code, test_env)withOneRestart(expr, restarts[[1L]])
new_expectations <- the$test_expectations > starting_expectations48: if (snapshot_skipped) {withRestarts(tryCatch(withCallingHandlers({ skip("On CRAN") eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { else if (!new_expectations && skip_on_empty) { skip("On CRAN") } skip_empty() else if (!new_expectations && skip_on_empty) { } skip_empty()}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) skip(paste0("{", e$package, "} is not installed.")) } }}, snapshot_on_cran = function(cnd) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
end_test = function() {34: })doWithOneRestart(return(expr), restart)
35: 49: withOneRestart(expr, restarts[[1L]])test_code(code = exprs, env = env, reporter = get_reporter() %||%
36: StopReporter$new())
withRestarts(tryCatch(withCallingHandlers({50: eval(code, test_env)source_file(path, env = env(env), desc = desc, shuffle = shuffle, new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { error_call = error_call) skip("On CRAN")
} else if (!new_expectations && skip_on_empty) {51: skip_empty()FUN(X[[i]], ...) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {52: if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, } error_call = error_call)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")53: }, skip = handle_skip, warning = handle_warning, message = handle_message, doTryCatch(return(expr), name, parentenv, handler) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
end_test = function() {54: })tryCatchOne(expr, names, parentenv, handlers[[1L]])
37: 55: test_code(code, parent.frame())tryCatchList(expr, classes, parentenv, handlers)
38: test_that("Is the seed set properly?", {56: out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10)tryCatch(code, testthat_abort_reporter = function(cnd) { out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) cat(conditionMessage(cnd), "\n") expect_equal(out1$seed, out2$seed) NULL})
})39:
eval(code, test_env)
57: 40: with_reporter(reporters$multi, lapply(test_paths, test_one_file, eval(code, test_env)
env = env, desc = desc, shuffle = shuffle, error_call = error_call))
41: 58: withCallingHandlers({test_files_serial(test_dir = test_dir, test_package = test_package, eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, if (snapshot_skipped) { env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, skip("On CRAN") desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call) }
else if (!new_expectations && skip_on_empty) {59: skip_empty()test_files(test_dir = path, test_paths = test_paths, test_package = package, } reporter = reporter, load_helpers = load_helpers, env = env, }, expectation = handle_expectation, packageNotFoundError = function(e) { stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, if (on_cran()) { load_package = load_package, parallel = parallel, shuffle = shuffle) skip(paste0("{", e$package, "} is not installed."))
}60: }, snapshot_on_cran = function(cnd) {test_dir("testthat", package = package, reporter = reporter, snapshot_skipped <<- TRUE ..., load_package = "installed") invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 61: error = handle_error, interrupt = handle_interrupt)test_check("FCO")
42:
doTryCatch(return(expr), name, parentenv, handler)
An irrecoverable exception occurred. R is aborting now ...
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
Traceback:
1: 29: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)withCallingHandlers({
eval(code, test_env) 2: new_expectations <- the$test_expectations > starting_expectationslav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, if (snapshot_skipped) { fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, skip("On CRAN") slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, } unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], else if (!new_expectations && skip_on_empty) { sampling_weights_type = swt_type)
skip_empty() 3: }lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, }, expectation = handle_expectation, packageNotFoundError = function(e) { wls_v = wls_v, nacov = nacov) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed.")) 4: }lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, }, snapshot_on_cran = function(cnd) { lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, snapshot_skipped <<- TRUE sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 5: error = handle_error, interrupt = handle_interrupt)lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")30: doTryCatch(return(expr), name, parentenv, handler)
6: 31: eval(sc, parent.frame())tryCatchOne(expr, names, parentenv, handlers[[1L]])
7: 32: eval(sc, parent.frame())tryCatchList(expr, classes, parentenv, handlers)
8: 33: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, tryCatch(withCallingHandlers({ std.lv = TRUE, warn = FALSE) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) { 9: skip("On CRAN")doTryCatch(return(expr), name, parentenv, handler) }
else if (!new_expectations && skip_on_empty) {10: skip_empty()tryCatchOne(expr, names, parentenv, handlers[[1L]])
}11: }, expectation = handle_expectation, packageNotFoundError = function(e) {tryCatchList(expr, classes, parentenv, handlers) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))12: }}, snapshot_on_cran = function(cnd) {tryCatch(expr, error = function(e) { snapshot_skipped <<- TRUE call <- conditionCall(e) invokeRestart("muffle_cran_snapshot") if (!is.null(call)) {}, skip = handle_skip, warning = handle_warning, message = handle_message, if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) error = handle_error, interrupt = handle_interrupt), error = handle_fatal) dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ")34: LONG <- 75LdoWithOneRestart(return(expr), restart)
sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")35: if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], withOneRestart(expr, restarts[[1L]]) type = "b")
36: if (w > LONG) withRestarts(tryCatch(withCallingHandlers({ prefix <- paste0(prefix, "\n ") eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { } skip("On CRAN") } else if (!new_expectations && skip_on_empty) { else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") skip_empty() .Internal(seterrmessage(msg[1L])) } if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)}, expectation = handle_expectation, packageNotFoundError = function(e) { .Internal(printDeferredWarnings()) if (on_cran()) { } skip(paste0("{", e$package, "} is not installed.")) invisible(structure(msg, class = "try-error", condition = e))}) }
}, snapshot_on_cran = function(cnd) {13: snapshot_skipped <<- TRUEtry(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 14: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, end_test = function() { free1 = free, s = s, k = k, nf = nf) })
37: 15: test_code(code = exprs, env = env, reporter = get_reporter() %||% FUN(X[[i]], ...) StopReporter$new())
38: 16: lapply(X = S, FUN = FUN, ...)source_file(path, env = env(env), desc = desc, shuffle = shuffle,
error_call = error_call)17:
39: doTryCatch(return(expr), name, parentenv, handler)
FUN(X[[i]], ...)18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])40:
lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, 19: error_call = error_call)tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) {41: call <- conditionCall(e)doTryCatch(return(expr), name, parentenv, handler) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch)))
call <- sys.call(-4L)42: dcall <- deparse(call, nlines = 1L)tryCatchOne(expr, names, parentenv, handlers[[1L]]) prefix <- paste("Error in", dcall, ": ")
LONG <- 75L43: sm <- strsplit(conditionMessage(e), "\n")[[1L]]tryCatchList(expr, classes, parentenv, handlers) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")
if (is.na(w)) 44: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], tryCatch(code, testthat_abort_reporter = function(cnd) { type = "b") cat(conditionMessage(cnd), "\n") if (w > LONG) NULL prefix <- paste0(prefix, "\n ")}) }
else prefix <- "Error : "45: msg <- paste0(prefix, conditionMessage(e), "\n")with_reporter(reporters$multi, lapply(test_paths, test_one_file, .Internal(seterrmessage(msg[1L])) env = env, desc = desc, shuffle = shuffle, error_call = error_call)) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile)46: .Internal(printDeferredWarnings())test_files_serial(test_dir = test_dir, test_package = test_package, } test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, invisible(structure(msg, class = "try-error", condition = e)) env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, }) desc = desc, load_package = load_package, shuffle = shuffle,
error_call = error_call)21:
try(lapply(X = S, FUN = FUN, ...), silent = TRUE)47:
test_files(test_dir = path, test_paths = test_paths, test_package = package, 22: reporter = reporter, load_helpers = load_helpers, env = env, sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
load_package = load_package, parallel = parallel, shuffle = shuffle)23:
FUN(X[[i]], ...)48:
test_dir("testthat", package = package, reporter = reporter, 24: ..., load_package = "installed")lapply(seq_len(cores), inner.do)
49: 25: test_check("FCO")parallel::mclapply(1:rep, function(r) {
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, An irrecoverable exception occurred. R is aborting now ...
free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
*** caught segfault ***
23: address 0x110, cause 'invalid permissions'
FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend-34.R
Saving _problems/test-recommend-56.R
Saving _problems/test-recommend-69.R
Saving _problems/test-recommend-94.R
Saving _problems/test-recommend-112.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19:
Traceback:
tryCatchList(expr, classes, parentenv, handlers) 1:
lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, 20: fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, tryCatch(expr, error = function(e) { slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, call <- conditionCall(e) if (!is.null(call)) { unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], if (identical(call[[1L]], quote(doTryCatch))) sampling_weights_type = swt_type) call <- sys.call(-4L)
dcall <- deparse(call, nlines = 1L) 3: prefix <- paste("Error in", dcall, ": ")lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, LONG <- 75L wls_v = wls_v, nacov = nacov) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") 4: if (is.na(w)) lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, type = "b") sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, if (w > LONG) ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) prefix <- paste0(prefix, "\n ")
} 5: else prefix <- "Error : "lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, msg <- paste0(prefix, conditionMessage(e), "\n") std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) { 6: cat(msg, file = outFile)eval(sc, parent.frame()) .Internal(printDeferredWarnings())
} invisible(structure(msg, class = "try-error", condition = e)) 7: })eval(sc, parent.frame())
21: 8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, try(lapply(X = S, FUN = FUN, ...), silent = TRUE) std.lv = TRUE, warn = FALSE)
22: 9: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))doTryCatch(return(expr), name, parentenv, handler)
10: 23: FUN(X[[i]], ...)tryCatchOne(expr, names, parentenv, handlers[[1L]])
24: 11: lapply(seq_len(cores), inner.do)tryCatchList(expr, classes, parentenv, handlers)
25: 12: tryCatch(expr, error = function(e) { call <- conditionCall(e)parallel::mclapply(1:rep, function(r) { if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, call <- sys.call(-4L) free1 = free, s = s, k = k, nf = nf) dcall <- deparse(call, nlines = 1L)}, mc.cores = cores) prefix <- paste("Error in", dcall, ": ")
LONG <- 75L26: gen_fit(mod1 = mod, x = bb1992, rep = 10) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")27: if (is.na(w)) eval(code, test_env)
w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 28: type = "b")eval(code, test_env) if (w > LONG) prefix <- paste0(prefix, "\n ")
}29: else prefix <- "Error : "withCallingHandlers({ msg <- paste0(prefix, conditionMessage(e), "\n") eval(code, test_env) .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { new_expectations <- the$test_expectations > starting_expectations cat(msg, file = outFile) if (snapshot_skipped) { .Internal(printDeferredWarnings()) skip("On CRAN") } } invisible(structure(msg, class = "try-error", condition = e)) else if (!new_expectations && skip_on_empty) {}) skip_empty()
}13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, }, expectation = handle_expectation, packageNotFoundError = function(e) { std.lv = TRUE, warn = FALSE), silent = TRUE) if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))
14: }generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, }, snapshot_on_cran = function(cnd) { free1 = free, s = s, k = k, nf = nf)
snapshot_skipped <<- TRUE15: invokeRestart("muffle_cran_snapshot")FUN(X[[i]], ...)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt)16:
lapply(X = S, FUN = FUN, ...)30:
doTryCatch(return(expr), name, parentenv, handler)17:
doTryCatch(return(expr), name, parentenv, handler)31:
tryCatchOne(expr, names, parentenv, handlers[[1L]])18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])32:
tryCatchList(expr, classes, parentenv, handlers)19:
tryCatchList(expr, classes, parentenv, handlers)33:
tryCatch(withCallingHandlers({20: eval(code, test_env)tryCatch(expr, error = function(e) { new_expectations <- the$test_expectations > starting_expectations call <- conditionCall(e) if (snapshot_skipped) { if (!is.null(call)) { skip("On CRAN") if (identical(call[[1L]], quote(doTryCatch))) } call <- sys.call(-4L) else if (!new_expectations && skip_on_empty) { dcall <- deparse(call, nlines = 1L) skip_empty() prefix <- paste("Error in", dcall, ": ") } LONG <- 75L}, expectation = handle_expectation, packageNotFoundError = function(e) { sm <- strsplit(conditionMessage(e), "\n")[[1L]] if (on_cran()) { w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") skip(paste0("{", e$package, "} is not installed.")) if (is.na(w)) } w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], }, snapshot_on_cran = function(cnd) { type = "b") snapshot_skipped <<- TRUE if (w > LONG) invokeRestart("muffle_cran_snapshot") prefix <- paste0(prefix, "\n ")}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal) else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n")34: .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {doWithOneRestart(return(expr), restart)
cat(msg, file = outFile)35: .Internal(printDeferredWarnings())withOneRestart(expr, restarts[[1L]]) }
invisible(structure(msg, class = "try-error", condition = e))36: })withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations21: if (snapshot_skipped) {try(lapply(X = S, FUN = FUN, ...), silent = TRUE) skip("On CRAN")
}22: else if (!new_expectations && skip_on_empty) {sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) skip_empty()
}23: }, expectation = handle_expectation, packageNotFoundError = function(e) {FUN(X[[i]], ...) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))24: lapply(seq_len(cores), inner.do) }
}, snapshot_on_cran = function(cnd) {25: snapshot_skipped <<- TRUEparallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, invokeRestart("muffle_cran_snapshot") free1 = free, s = s, k = k, nf = nf)}, skip = handle_skip, warning = handle_warning, message = handle_message, }, mc.cores = cores) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
26: end_test = function() {gen_fit(mod1 = mod, x = bb1992, rep = 10) })
27: 37: eval(code, test_env)test_code(code = exprs, env = env, reporter = get_reporter() %||%
StopReporter$new())28:
eval(code, test_env)
38: 29: withCallingHandlers({source_file(path, env = env(env), desc = desc, shuffle = shuffle, eval(code, test_env) error_call = error_call) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {39: skip("On CRAN")FUN(X[[i]], ...) }
else if (!new_expectations && skip_on_empty) { skip_empty()40: }}, expectation = handle_expectation, packageNotFoundError = function(e) {lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, if (on_cran()) { error_call = error_call) skip(paste0("{", e$package, "} is not installed."))
}41: }, snapshot_on_cran = function(cnd) {doTryCatch(return(expr), name, parentenv, handler) snapshot_skipped <<- TRUE
42: invokeRestart("muffle_cran_snapshot")tryCatchOne(expr, names, parentenv, handlers[[1L]])}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt)43:
tryCatchList(expr, classes, parentenv, handlers)30:
doTryCatch(return(expr), name, parentenv, handler)44:
31: tryCatch(code, testthat_abort_reporter = function(cnd) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) cat(conditionMessage(cnd), "\n")
NULL32: })tryCatchList(expr, classes, parentenv, handlers)
45: 33: with_reporter(reporters$multi, lapply(test_paths, test_one_file, tryCatch(withCallingHandlers({ env = env, desc = desc, shuffle = shuffle, error_call = error_call)) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations46: if (snapshot_skipped) {test_files_serial(test_dir = test_dir, test_package = test_package, skip("On CRAN") test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, } env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, else if (!new_expectations && skip_on_empty) { desc = desc, load_package = load_package, shuffle = shuffle, skip_empty() error_call = error_call) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {47: if (on_cran()) {test_files(test_dir = path, test_paths = test_paths, test_package = package, skip(paste0("{", e$package, "} is not installed.")) reporter = reporter, load_helpers = load_helpers, env = env, } stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, }, snapshot_on_cran = function(cnd) { load_package = load_package, parallel = parallel, shuffle = shuffle) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")48: }, skip = handle_skip, warning = handle_warning, message = handle_message, test_dir("testthat", package = package, reporter = reporter, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) ..., load_package = "installed")
34: 49: doWithOneRestart(return(expr), restart)test_check("FCO")
35: An irrecoverable exception occurred. R is aborting now ...
withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message,
Traceback:
error = handle_error, interrupt = handle_interrupt) 1:
lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)30: doTryCatch(return(expr), name, parentenv, handler)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, 31: fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, tryCatchOne(expr, names, parentenv, handlers[[1L]]) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], 32: tryCatchList(expr, classes, parentenv, handlers) sampling_weights_type = swt_type)
33: 3: tryCatch(withCallingHandlers({ eval(code, test_env)lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, new_expectations <- the$test_expectations > starting_expectations wls_v = wls_v, nacov = nacov) if (snapshot_skipped) {
skip("On CRAN") 4: }lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, else if (!new_expectations && skip_on_empty) { lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, skip_empty() } sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, }, expectation = handle_expectation, packageNotFoundError = function(e) { ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed.")) 5: }lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE 6: invokeRestart("muffle_cran_snapshot")eval(sc, parent.frame())}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: 7: doWithOneRestart(return(expr), restart)eval(sc, parent.frame())
35: 8: withOneRestart(expr, restarts[[1L]])lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
36:
9: withRestarts(tryCatch(withCallingHandlers({doTryCatch(return(expr), name, parentenv, handler) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {
10: skip("On CRAN")tryCatchOne(expr, names, parentenv, handlers[[1L]]) } else if (!new_expectations && skip_on_empty) {
11: skip_empty()tryCatchList(expr, classes, parentenv, handlers) }
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {12: skip(paste0("{", e$package, "} is not installed."))tryCatch(expr, error = function(e) { }}, snapshot_on_cran = function(cnd) { call <- conditionCall(e) snapshot_skipped <<- TRUE if (!is.null(call)) { invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, if (identical(call[[1L]], quote(doTryCatch))) error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) })
prefix <- paste("Error in", dcall, ": ")37: LONG <- 75Ltest_code(code = exprs, env = env, reporter = get_reporter() %||% sm <- strsplit(conditionMessage(e), "\n")[[1L]] StopReporter$new()) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w))
w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, type = "b") error_call = error_call) if (w > LONG)
prefix <- paste0(prefix, "\n ")39: }FUN(X[[i]], ...) else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n")40: .Internal(seterrmessage(msg[1L]))lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, if (!silent && isTRUE(getOption("show.error.messages"))) { error_call = error_call)
cat(msg, file = outFile)41: .Internal(printDeferredWarnings())doTryCatch(return(expr), name, parentenv, handler)
} invisible(structure(msg, class = "try-error", condition = e))42: })tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: 13: tryCatchList(expr, classes, parentenv, handlers)try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE), silent = TRUE)44:
tryCatch(code, testthat_abort_reporter = function(cnd) {14: cat(conditionMessage(cnd), "\n")generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, NULL free1 = free1, free2 = free2, s = s, k = k, nf = nf)})
15: 45: FUN(X[[i]], ...)with_reporter(reporters$multi, lapply(test_paths, test_one_file,
env = env, desc = desc, shuffle = shuffle, error_call = error_call))16:
lapply(X = S, FUN = FUN, ...)46:
test_files_serial(test_dir = test_dir, test_package = test_package, 17: test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, doTryCatch(return(expr), name, parentenv, handler) desc = desc, load_package = load_package, shuffle = shuffle,
error_call = error_call)18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])47:
test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, 19: stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, tryCatchList(expr, classes, parentenv, handlers) load_package = load_package, parallel = parallel, shuffle = shuffle)
20: 48: tryCatch(expr, error = function(e) {test_dir("testthat", package = package, reporter = reporter, call <- conditionCall(e) ..., load_package = "installed") if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 49: call <- sys.call(-4L)test_check("FCO") dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ")An irrecoverable exception occurred. R is aborting now ...
LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))
*** caught segfault ***
if (!silent && isTRUE(getOption("show.error.messages"))) {address 0x110, cause 'invalid permissions'
cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend_dv-43.R
Saving _problems/test-recommend_dv-51.R
Saving _problems/test-recommend_dv-59.R
Saving _problems/test-recommend_dv-68.R
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-recommend.R:29:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #1 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:29:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:51:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #3 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:51:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:62:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #4 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:62:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:86:13'): Is the result rounded properly? ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:86:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:104:13'): Are the indices properly used when override is TRUE? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:104:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend_dv.R:40:13'): Are multiple fit indices supported? ────
Error in `recommend_dv(fits = fits.dv.merge, index = c("CFI", "SRMR", "GFI"))`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend_dv.R:40:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(...)
── Error ('test-recommend_dv.R:49:13'): Is the proper dv technique used? merging? ──
Error in `recommend_dv(fits = fits.dv.merge, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.merge, )) at test-recommend_dv.R:49:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.merge, )
── Error ('test-recommend_dv.R:57:13'): Is the proper dv technique used? constraining? ──
Error in `recommend_dv(fits = fits.dv.con, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, )) at test-recommend_dv.R:57:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, )
── Error ('test-recommend_dv.R:65:13'): Is the result rounded properly? ────────
Error in `recommend_dv(fits = fits.dv.con, digits = 5)`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, digits = 5)) at test-recommend_dv.R:65:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, digits = 5)
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64