Last updated on 2026-02-03 14:51:34 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.1 | 5.43 | 970.03 | 975.46 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.1 | 4.01 | 682.63 | 686.64 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.1 | 9.00 | 1289.61 | 1298.61 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.3.1 | 9.00 | 1494.13 | 1503.13 | OK | |
| r-devel-windows-x86_64 | 0.3.1 | 7.00 | 741.00 | 748.00 | OK | |
| r-patched-linux-x86_64 | 0.3.0 | 5.81 | 901.93 | 907.74 | OK | |
| r-release-linux-x86_64 | 0.3.1 | 5.38 | 931.04 | 936.42 | OK | |
| r-release-macos-arm64 | 0.3.1 | 1.00 | 1365.00 | 1366.00 | OK | |
| r-release-macos-x86_64 | 0.3.1 | 4.00 | 1799.00 | 1803.00 | OK | |
| r-release-windows-x86_64 | 0.3.1 | 8.00 | 749.00 | 757.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.1 | 1.00 | 975.00 | 976.00 | NOTE | |
| r-oldrel-macos-x86_64 | 0.3.1 | 18.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 0.3.1 | 11.00 | 1072.00 | 1083.00 | NOTE |
Version: 0.3.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘CodelistDiagnostics.Rmd’ using rmarkdown
trying URL 'https://cdmconnectordata.blob.core.windows.net/cdmconnector-example-data/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
Quitting from CodelistDiagnostics.Rmd:87-89 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlib_error_package_not_found>
Error in `safeFontFamily()`:
! The package "systemfonts" is required.
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'CodelistDiagnostics.Rmd' failed with diagnostics:
The package "systemfonts" is required.
--- failed re-building ‘CodelistDiagnostics.Rmd’
--- re-building ‘CohortDiagnostics.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘CohortDiagnostics.Rmd’
--- re-building ‘DatabaseDiagnostics.Rmd’ using rmarkdown
trying URL 'https://cdmconnectordata.blob.core.windows.net/cdmconnector-example-data/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘DatabaseDiagnostics.Rmd’
--- re-building ‘PhenotypeDiagnostics.Rmd’ using rmarkdown
trying URL 'https://cdmconnectordata.blob.core.windows.net/cdmconnector-example-data/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘PhenotypeDiagnostics.Rmd’
--- re-building ‘PhenotypeExpectations.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘PhenotypeExpectations.Rmd’
--- re-building ‘PopulationDiagnostics.Rmd’ using rmarkdown
trying URL 'https://cdmconnectordata.blob.core.windows.net/cdmconnector-example-data/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
Quitting from PopulationDiagnostics.Rmd:70-78 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlib_error_package_not_found>
Error in `safeFontFamily()`:
! The package "systemfonts" is required.
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'PopulationDiagnostics.Rmd' failed with diagnostics:
The package "systemfonts" is required.
--- failed re-building ‘PopulationDiagnostics.Rmd’
--- re-building ‘ShinyDiagnostics.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘ShinyDiagnostics.Rmd’
SUMMARY: processing the following files failed:
‘CodelistDiagnostics.Rmd’ ‘PopulationDiagnostics.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.1
Check: installed package size
Result: NOTE
installed size is 6.2Mb
sub-directories of 1Mb or more:
doc 5.4Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-windows-x86_64
Version: 0.3.1
Check: package dependencies
Result: ERROR
Packages required and available but unsuitable versions:
'CodelistGenerator', 'CohortCharacteristics', 'OmopSketch'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-oldrel-macos-x86_64