Last updated on 2026-02-03 14:51:31 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.1 | 5.73 | 90.98 | 96.71 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 4.00 | 67.41 | 71.41 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.1 | 9.00 | 147.85 | 156.85 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.1 | 10.00 | 157.76 | 167.76 | ERROR | |
| r-devel-windows-x86_64 | 1.0.1 | 9.00 | 137.00 | 146.00 | OK | |
| r-patched-linux-x86_64 | 1.0.1 | 4.90 | 84.31 | 89.21 | OK | |
| r-release-linux-x86_64 | 1.0.1 | 4.64 | 84.66 | 89.30 | OK | |
| r-release-macos-arm64 | 1.0.1 | 2.00 | 30.00 | 32.00 | OK | |
| r-release-macos-x86_64 | 1.0.1 | 4.00 | 141.00 | 145.00 | OK | |
| r-release-windows-x86_64 | 1.0.1 | 9.00 | 131.00 | 140.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.1 | 1.00 | 40.00 | 41.00 | OK | |
| r-oldrel-macos-x86_64 | 1.0.1 | 4.00 | 245.00 | 249.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.1 | 11.00 | 143.00 | 154.00 | OK |
Version: 1.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [64s/79s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mantis)
>
> test_check("mantis")
Saving _problems/test-plots-interactive-21.R
Saving _problems/test-plots-interactive-44.R
Saving _problems/test-prepare-25.R
[ FAIL 3 | WARN 3 | SKIP 3 | PASS 485 ]
══ Skipped tests (3) ═══════════════════════════════════════════════════════════
• On CRAN (3): 'test-plots-static.R:1:1', 'test-plots-static.R:27:1',
'test-plots-static.R:53:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-plots-interactive.R:17:3'): output_table_interactive() avoids min/max warnings when all values are NA ──
Expected `output_table_interactive(...)` not to throw any warnings.
Actually got a <rlang_warning> with message:
There was 1 warning in `dplyr::mutate()`.
i In argument: `value_for_history = dplyr::case_when(...)`.
i In group 1: `item.item = "na"`.
Caused by warning:
! Calling `case_when()` with size 1 LHS inputs and size >1 RHS inputs was deprecated in dplyr 1.2.0.
i This `case_when()` statement can result in subtle silent bugs and is very inefficient.
Please use a series of if statements instead:
```
# Previously
case_when(scalar_lhs1 ~ rhs1, scalar_lhs2 ~ rhs2, .default = default)
# Now
if (scalar_lhs1) {
rhs1
} else if (scalar_lhs2) {
rhs2
} else {
default
}
```
── Failure ('test-plots-interactive.R:40:3'): output_table_interactive() avoids min/max warnings when all deltas are NA ──
Expected `output_table_interactive(...)` not to throw any warnings.
Actually got a <rlang_warning> with message:
There was 1 warning in `dplyr::mutate()`.
i In argument: `value_for_history = dplyr::case_when(...)`.
i In group 1: `item.item = "sparse"`.
Caused by warning:
! Calling `case_when()` with size 1 LHS inputs and size >1 RHS inputs was deprecated in dplyr 1.2.0.
i This `case_when()` statement can result in subtle silent bugs and is very inefficient.
Please use a series of if statements instead:
```
# Previously
case_when(scalar_lhs1 ~ rhs1, scalar_lhs2 ~ rhs2, .default = default)
# Now
if (scalar_lhs1) {
rhs1
} else if (scalar_lhs2) {
rhs2
} else {
default
}
```
── Failure ('test-prepare.R:23:3'): prepare_table() avoids min/max warnings when all values in a group are NA ──
Expected `prepare_table(prepared_df, inputspec = inputspec)` not to throw any warnings.
Actually got a <rlang_warning> with message:
There were 2 warnings in `dplyr::mutate()`.
The first warning was:
i In argument: `value_for_history = dplyr::case_when(...)`.
i In group 1: `item.item = "na"`.
Caused by warning:
! Calling `case_when()` with size 1 LHS inputs and size >1 RHS inputs was deprecated in dplyr 1.2.0.
i This `case_when()` statement can result in subtle silent bugs and is very inefficient.
Please use a series of if statements instead:
```
# Previously
case_when(scalar_lhs1 ~ rhs1, scalar_lhs2 ~ rhs2, .default = default)
# Now
if (scalar_lhs1) {
rhs1
} else if (scalar_lhs2) {
rhs2
} else {
default
}
```
i Run `dplyr::last_dplyr_warnings()` to see the 1 remaining warning.
[ FAIL 3 | WARN 3 | SKIP 3 | PASS 485 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [65s/180s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mantis)
>
> test_check("mantis")
Saving _problems/test-plots-interactive-21.R
Saving _problems/test-plots-interactive-44.R
Saving _problems/test-prepare-25.R
[ FAIL 3 | WARN 3 | SKIP 3 | PASS 485 ]
══ Skipped tests (3) ═══════════════════════════════════════════════════════════
• On CRAN (3): 'test-plots-static.R:1:1', 'test-plots-static.R:27:1',
'test-plots-static.R:53:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-plots-interactive.R:17:3'): output_table_interactive() avoids min/max warnings when all values are NA ──
Expected `output_table_interactive(...)` not to throw any warnings.
Actually got a <rlang_warning> with message:
There was 1 warning in `dplyr::mutate()`.
i In argument: `value_for_history = dplyr::case_when(...)`.
i In group 1: `item.item = "na"`.
Caused by warning:
! Calling `case_when()` with size 1 LHS inputs and size >1 RHS inputs was deprecated in dplyr 1.2.0.
i This `case_when()` statement can result in subtle silent bugs and is very inefficient.
Please use a series of if statements instead:
```
# Previously
case_when(scalar_lhs1 ~ rhs1, scalar_lhs2 ~ rhs2, .default = default)
# Now
if (scalar_lhs1) {
rhs1
} else if (scalar_lhs2) {
rhs2
} else {
default
}
```
── Failure ('test-plots-interactive.R:40:3'): output_table_interactive() avoids min/max warnings when all deltas are NA ──
Expected `output_table_interactive(...)` not to throw any warnings.
Actually got a <rlang_warning> with message:
There was 1 warning in `dplyr::mutate()`.
i In argument: `value_for_history = dplyr::case_when(...)`.
i In group 1: `item.item = "sparse"`.
Caused by warning:
! Calling `case_when()` with size 1 LHS inputs and size >1 RHS inputs was deprecated in dplyr 1.2.0.
i This `case_when()` statement can result in subtle silent bugs and is very inefficient.
Please use a series of if statements instead:
```
# Previously
case_when(scalar_lhs1 ~ rhs1, scalar_lhs2 ~ rhs2, .default = default)
# Now
if (scalar_lhs1) {
rhs1
} else if (scalar_lhs2) {
rhs2
} else {
default
}
```
── Failure ('test-prepare.R:23:3'): prepare_table() avoids min/max warnings when all values in a group are NA ──
Expected `prepare_table(prepared_df, inputspec = inputspec)` not to throw any warnings.
Actually got a <rlang_warning> with message:
There were 2 warnings in `dplyr::mutate()`.
The first warning was:
i In argument: `value_for_history = dplyr::case_when(...)`.
i In group 1: `item.item = "na"`.
Caused by warning:
! Calling `case_when()` with size 1 LHS inputs and size >1 RHS inputs was deprecated in dplyr 1.2.0.
i This `case_when()` statement can result in subtle silent bugs and is very inefficient.
Please use a series of if statements instead:
```
# Previously
case_when(scalar_lhs1 ~ rhs1, scalar_lhs2 ~ rhs2, .default = default)
# Now
if (scalar_lhs1) {
rhs1
} else if (scalar_lhs2) {
rhs2
} else {
default
}
```
i Run `dplyr::last_dplyr_warnings()` to see the 1 remaining warning.
[ FAIL 3 | WARN 3 | SKIP 3 | PASS 485 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc