Last updated on 2026-02-03 14:51:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.6.1 | 7.21 | 81.44 | 88.65 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.6.1 | 5.33 | 56.27 | 61.60 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.6.1 | 12.00 | 112.34 | 124.34 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.6.1 | 11.00 | 120.99 | 131.99 | ERROR | |
| r-devel-windows-x86_64 | 0.6.1 | 10.00 | 105.00 | 115.00 | NOTE | --no-vignettes |
| r-patched-linux-x86_64 | 0.6.1 | 6.85 | 70.90 | 77.75 | NOTE | |
| r-release-linux-x86_64 | 0.6.1 | 6.12 | 70.88 | 77.00 | NOTE | |
| r-release-macos-arm64 | 0.6.1 | NOTE | ||||
| r-release-macos-x86_64 | 0.6.1 | 3.00 | 96.00 | 99.00 | NOTE | |
| r-release-windows-x86_64 | 0.6.1 | 9.00 | 119.00 | 128.00 | NOTE | --no-vignettes |
| r-oldrel-macos-arm64 | 0.6.1 | NOTE | ||||
| r-oldrel-macos-x86_64 | 0.6.1 | 4.00 | 82.00 | 86.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.6.1 | 11.00 | 112.00 | 123.00 | NOTE | --no-vignettes |
Version: 0.6.1
Check: Rd files
Result: NOTE
checkRd: (-1) dprime.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dprime.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dprime.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dprime.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dprime.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.6.1
Check: examples
Result: ERROR
Running examples in ‘psycho-Ex.R’ failed
The error most likely occurred in:
> ### Name: assess
> ### Title: Compare a patient's score to a control group
> ### Aliases: assess
>
> ### ** Examples
>
> result <- assess(patient = 124, mean = 100, sd = 15, n = 100)
Error:
! `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `mutate()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─psycho::assess(patient = 124, mean = 100, sd = 15, n = 100)
2. │ └─psycho::crawford.test(...)
3. │ └─... %>% ggplot(aes_string(x = "x", ymin = 0, ymax = "y"))
4. ├─ggplot2::ggplot(., aes_string(x = "x", ymin = 0, ymax = "y"))
5. └─dplyr::mutate_(., x = "scales::rescale(x, from=c(0, 1), to = c(sample_mean, sample_mean+sample_sd))")
6. └─dplyr:::lazy_defunct("mutate")
7. └─lifecycle::deprecate_stop(...)
8. └─lifecycle:::deprecate_stop0(msg)
9. └─rlang::cnd_signal(...)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.6.1
Check: tests
Result: ERROR
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(psycho)
>
> test_check("psycho")
Saving _problems/test-assess-10.R
Saving _problems/test-assess-45.R
The Crawford-Howell (1998) t-test suggests no dissociation between test X and test Y (t(5) = 2.10, p p = 0.090). The patient's score on test X is not significantly altered compared to its score on test Y.
.0.00%
.33.00%
.67.00%
.100.00%
1
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 17 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-assess.R:7:3'): assess ─────────────────────────────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `mutate()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─psycho::assess(...) at test-assess.R:7:3
2. │ └─psycho::crawford.test(...)
3. │ └─... %>% ggplot(aes_string(x = "x", ymin = 0, ymax = "y"))
4. ├─ggplot2::ggplot(., aes_string(x = "x", ymin = 0, ymax = "y"))
5. └─dplyr::mutate_(., x = "scales::rescale(x, from=c(0, 1), to = c(sample_mean, sample_mean+sample_sd))")
6. └─dplyr:::lazy_defunct("mutate")
7. └─lifecycle::deprecate_stop(...)
8. └─lifecycle:::deprecate_stop0(msg)
9. └─rlang::cnd_signal(...)
── Error ('test-assess.R:42:3'): crawford.test ─────────────────────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `mutate()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─psycho::crawford.test(...) at test-assess.R:42:3
2. │ └─... %>% ggplot(aes_string(x = "x", ymin = 0, ymax = "y"))
3. ├─ggplot2::ggplot(., aes_string(x = "x", ymin = 0, ymax = "y"))
4. └─dplyr::mutate_(., x = "scales::rescale(x, from=c(0, 1), to = c(sample_mean, sample_mean+sample_sd))")
5. └─dplyr:::lazy_defunct("mutate")
6. └─lifecycle::deprecate_stop(...)
7. └─lifecycle:::deprecate_stop0(msg)
8. └─rlang::cnd_signal(...)
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 17 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.6.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [10s/14s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(psycho)
>
> test_check("psycho")
Saving _problems/test-assess-10.R
Saving _problems/test-assess-45.R
The Crawford-Howell (1998) t-test suggests no dissociation between test X and test Y (t(5) = 2.10, p p = 0.090). The patient's score on test X is not significantly altered compared to its score on test Y.
.0.00%
.33.00%
.67.00%
.100.00%
1
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 17 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-assess.R:7:3'): assess ─────────────────────────────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `mutate()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─psycho::assess(...) at test-assess.R:7:3
2. │ └─psycho::crawford.test(...)
3. │ └─... %>% ggplot(aes_string(x = "x", ymin = 0, ymax = "y"))
4. ├─ggplot2::ggplot(., aes_string(x = "x", ymin = 0, ymax = "y"))
5. └─dplyr::mutate_(., x = "scales::rescale(x, from=c(0, 1), to = c(sample_mean, sample_mean+sample_sd))")
6. └─dplyr:::lazy_defunct("mutate")
7. └─lifecycle::deprecate_stop(...)
8. └─lifecycle:::deprecate_stop0(msg)
9. └─rlang::cnd_signal(...)
── Error ('test-assess.R:42:3'): crawford.test ─────────────────────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `mutate()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─psycho::crawford.test(...) at test-assess.R:42:3
2. │ └─... %>% ggplot(aes_string(x = "x", ymin = 0, ymax = "y"))
3. ├─ggplot2::ggplot(., aes_string(x = "x", ymin = 0, ymax = "y"))
4. └─dplyr::mutate_(., x = "scales::rescale(x, from=c(0, 1), to = c(sample_mean, sample_mean+sample_sd))")
5. └─dplyr:::lazy_defunct("mutate")
6. └─lifecycle::deprecate_stop(...)
7. └─lifecycle:::deprecate_stop0(msg)
8. └─rlang::cnd_signal(...)
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 17 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.6.1
Flags: --no-vignettes
Check: Rd files
Result: NOTE
checkRd: (-1) dprime.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dprime.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dprime.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dprime.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) dprime.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64